FFCP PHASE1:Hg19::chr12:52913706..52913725,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:52913706..52913725,+
|short_description=p@chr12:52913706..52913725,+
|description=CAGE_peak_at_chr12:52913706..52913725,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52913706..52913725,+ | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr12:52913706..52913725,+ | |||
|id=chr12:52913706..52913725,+ | |||
|ontology_enrichment_celltype=CL:0002076!8.33e-30!43;CL:0000066!3.67e-22!254;CL:0002159!2.44e-21!13;CL:0002368!6.47e-21!13;CL:0000223!5.54e-20!59;CL:0002251!2.68e-14!21;CL:0002077!5.38e-14!33;CL:0002202!9.27e-12!9;CL:0002632!9.27e-12!9;CL:0000244!9.31e-12!4;CL:0000731!9.31e-12!4;CL:0000076!2.74e-10!62;CL:0000068!4.85e-10!3;CL:0000069!4.85e-10!3;CL:0000307!4.85e-10!3;CL:0000377!4.85e-10!3;CL:0002328!1.01e-09!3;CL:0002166!1.17e-09!3;CL:0000622!2.23e-09!5;CL:0002621!2.69e-09!3;CL:0000362!3.84e-09!8;CL:0000240!1.20e-08!6;CL:0000311!1.20e-08!6;CL:0000079!1.20e-08!6;CL:0000237!1.20e-08!6;CL:0000036!1.20e-08!6;CL:0000357!1.20e-08!6;CL:0000114!1.20e-08!6;CL:0000154!8.22e-08!6;CL:0000220!9.11e-08!246;CL:0002321!1.24e-07!248;CL:0002327!2.35e-07!4;CL:0000575!2.62e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002368;7.85e-23;13!CL:0002159;1.93e-21;14!CL:0002076;7.73e-20;42!CL:0000307;1.06e-15;3!CL:0002166;5.17e-15;3!CL:0002202;5.41e-14;9!CL:0002632;5.41e-14;9!CL:0000240;9.34e-14;6!CL:0000311;9.34e-14;6!CL:0000079;9.34e-14;6!CL:0000237;9.34e-14;6!CL:0002327;1.89e-11;4!CL:0000575;4.49e-11;2!CL:0000312;9.97e-10;5!CL:0002077;5.16e-09;34!CL:0002251;3.43e-08;20!CL:0002328;6.63e-08;3!CL:0002577;1.22e-07;3!CL:0002231;2.49e-07;3!CL:0002623;2.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.13e-26,42;CL:0002368,9.93e-23,13;CL:0002159,1.83e-21,14;CL:0000223,9.76e-18,58;CL:0000066,1.46e-17,253;CL:0000068,1.20e-15,3;CL:0000069,1.20e-15,3;CL:0000307,1.20e-15,3;CL:0000377,1.20e-15,3;CL:0002166,5.17e-15,3;CL:0002202,5.87e-14,9;CL:0002632,5.87e-14,9;CL:0000240,9.06e-14,6;CL:0000311,9.06e-14,6;CL:0000079,9.06e-14,6;CL:0000237,9.06e-14,6;CL:0000036,9.06e-14,6;CL:0000357,9.06e-14,6;CL:0000114,9.06e-14,6;CL:0002327,1.96e-11,4;CL:0000575,4.06e-11,2;CL:0002077,3.11e-10,34;CL:0000312,9.98e-10,5;CL:0002251,3.13e-08,20;CL:0002328,6.75e-08,3;CL:0002577,1.31e-07,3;CL:0002623,2.41e-07,3;CL:0002231,2.83e-07,3;CL:0002321,3.14e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000377;1.06e-15;3!CL:0000357;9.34e-14;6!CL:0000114;9.34e-14;6!CL:0000223;9.88e-10;58 | |||
|ontology_enrichment_disease=DOID:1749!3.58e-11!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!7.73e-15!72;UBERON:0000166!4.97e-14!21;UBERON:0000365!7.96e-14!5;UBERON:0000161!1.78e-12!35;UBERON:0004119!2.52e-12!169;UBERON:0000925!2.52e-12!169;UBERON:0006595!2.52e-12!169;UBERON:0000165!4.93e-12!28;UBERON:0000930!4.93e-12!28;UBERON:0005910!1.82e-11!6;UBERON:0003102!4.33e-10!95;UBERON:0001444!9.00e-10!48;UBERON:0004815!1.01e-09!3;UBERON:0002031!1.01e-09!3;UBERON:0007196!1.54e-09!14;UBERON:0001558!1.54e-09!14;UBERON:0003729!1.75e-09!5;UBERON:0001949!2.69e-09!3;UBERON:0000065!1.83e-08!53;UBERON:0000344!1.20e-07!12;UBERON:0002185!2.25e-07!4;UBERON:0001911!2.35e-07!4;UBERON:0005333!2.35e-07!4;UBERON:0008425!2.35e-07!4;UBERON:0005311!2.35e-07!4;UBERON:0001708!2.51e-07!4;UBERON:0001704!2.51e-07!4;UBERON:0003126!5.67e-07!7;UBERON:0001005!5.67e-07!7;UBERON:0003343!7.15e-07!4;UBERON:0004785!7.15e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.89e-11;4!UBERON:0001708;2.18e-11;4!UBERON:0008895;2.18e-11;4!UBERON:0011159;3.34e-09;5!UBERON:0007196;2.85e-08;15!UBERON:0001558;2.85e-08;15!UBERON:0004815;6.63e-08;3!UBERON:0002031;6.63e-08;3!UBERON:0000165;1.80e-07;28!UBERON:0001043;3.64e-07;3!UBERON:0001723;5.31e-07;3!UBERON:0001033;5.31e-07;3!UBERON:0003126;5.63e-07;7!UBERON:0001005;5.63e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.23e-12,99;UBERON:0001911,1.96e-11,4;UBERON:0005333,1.96e-11,4;UBERON:0008425,1.96e-11,4;UBERON:0005311,1.96e-11,4;UBERON:0001708,2.19e-11,4;UBERON:0008895,2.19e-11,4;UBERON:0004119,1.30e-10,160;UBERON:0000925,1.30e-10,160;UBERON:0006595,1.30e-10,160;UBERON:0000033,6.00e-10,56;UBERON:0001004,1.07e-09,74;UBERON:0011159,3.34e-09,5;UBERON:0000153,9.35e-09,62;UBERON:0007811,9.35e-09,62;UBERON:0007196,2.99e-08,15;UBERON:0001558,2.99e-08,15;UBERON:0004815,6.75e-08,3;UBERON:0002031,6.75e-08,3;UBERON:0010188,9.68e-08,6;UBERON:0002539,9.68e-08,6;UBERON:0008816,9.68e-08,6;UBERON:0000166,3.03e-07,22;UBERON:0000161,3.04e-07,36;UBERON:0000165,3.19e-07,29;UBERON:0000930,3.19e-07,29;UBERON:0001043,3.53e-07,3;UBERON:0009143,3.53e-07,3;UBERON:0001723,4.54e-07,3;UBERON:0001033,4.54e-07,3;UBERON:0010056,4.54e-07,3;UBERON:0000065,4.74e-07,54;UBERON:0003126,5.93e-07,7;UBERON:0001005,5.93e-07,7;UBERON:0005157,6.18e-07,47 | |||
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| ||
|short_description=p@chr12:52913706..52913725,+ | |||
}} | }} |
Latest revision as of 09:38, 24 July 2015
Short description: | p@chr12:52913706..52913725, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52913706..52913725, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 8.23e-12 | 99 |
mammary gland | 1.96e-11 | 4 |
mammary bud | 1.96e-11 | 4 |
mammary ridge | 1.96e-11 | 4 |
mammary placode | 1.96e-11 | 4 |
jaw skeleton | 2.19e-11 | 4 |
splanchnocranium | 2.19e-11 | 4 |
endoderm-derived structure | 1.30e-10 | 160 |
endoderm | 1.30e-10 | 160 |
presumptive endoderm | 1.30e-10 | 160 |
head | 6.00e-10 | 56 |
respiratory system | 1.07e-09 | 74 |
primary subdivision of cranial skeletal system | 3.34e-09 | 5 |
anterior region of body | 9.35e-09 | 62 |
craniocervical region | 9.35e-09 | 62 |
tracheobronchial tree | 2.99e-08 | 15 |
lower respiratory tract | 2.99e-08 | 15 |
lower respiratory tract epithelium | 6.75e-08 | 3 |
epithelium of bronchus | 6.75e-08 | 3 |
protuberance | 9.68e-08 | 6 |
pharyngeal arch | 9.68e-08 | 6 |
embryonic head | 9.68e-08 | 6 |
oral opening | 3.03e-07 | 22 |
orifice | 3.04e-07 | 36 |
mouth | 3.19e-07 | 29 |
stomodeum | 3.19e-07 | 29 |
esophagus | 3.53e-07 | 3 |
esophageal region | 3.53e-07 | 3 |
tongue | 4.54e-07 | 3 |
gustatory system | 4.54e-07 | 3 |
future tongue | 4.54e-07 | 3 |
respiratory tract | 4.74e-07 | 54 |
trachea | 5.93e-07 | 7 |
respiratory airway | 5.93e-07 | 7 |
epithelial fold | 6.18e-07 | 47 |