FFCP PHASE1:Hg19::chr12:56080980..56080982,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:56080980..56080982,+ | |||
|coexpression_cluster_id=C188 | |coexpression_cluster_id=C188 | ||
|description=CAGE_peak_at_chr12:56080980..56080982,+ | |description=CAGE_peak_at_chr12:56080980..56080982,+ | ||
|id=chr12:56080980..56080982,+ | |id=chr12:56080980..56080982,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;5.56e-16;1!UBERON:0005062;3.18e-15;4!UBERON:0007284;3.18e-15;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!7.19e-07!347 | |ontology_enrichment_uberon=UBERON:0000481!7.19e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002081;1.44e-29;2!UBERON:0002133;2.21e-29;2!UBERON:0004151;4.43e-20;3!UBERON:0003978;5.91e-20;3!UBERON:0000946;5.91e-20;3!UBERON:0002079;5.56e-16;1!UBERON:0002135;8.63e-16;1!UBERON:0002134;2.06e-15;1!UBERON:0005208;2.06e-15;1!UBERON:0004145;2.06e-15;1!UBERON:0005946;2.06e-15;1!UBERON:0005965;2.06e-15;1!UBERON:0002078;2.06e-15;1!UBERON:0002108;2.00e-12;4!UBERON:0000160;1.04e-07;17!UBERON:0002107;2.59e-07;19!UBERON:0006925;2.59e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,1.08e-29,2;UBERON:0010227,1.08e-29,2;UBERON:0002133,1.66e-29,2;UBERON:0004151,3.66e-20,3;UBERON:0003978,4.88e-20,3;UBERON:0009751,4.88e-20,3;UBERON:0000946,4.88e-20,3;UBERON:0002523,4.88e-20,3;UBERON:0005983,4.88e-20,3;UBERON:0002165,4.88e-20,3;UBERON:0002062,4.88e-20,3;UBERON:0007280,4.88e-20,3;UBERON:0002079,5.56e-16,1;UBERON:0002135,8.63e-16,1;UBERON:0002134,1.54e-15,1;UBERON:0005208,1.54e-15,1;UBERON:0005946,1.54e-15,1;UBERON:0005965,1.54e-15,1;UBERON:0002078,1.54e-15,1;UBERON:0002108,1.69e-12,4;UBERON:0004797,3.88e-09,7;UBERON:0000160,9.90e-08,17;UBERON:0002107,2.37e-07,19;UBERON:0006925,2.37e-07,19;UBERON:0008836,2.37e-07,19 | |||
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| ||
|short_description=p@chr12:56080980..56080982,+ | |short_description=p@chr12:56080980..56080982,+ | ||
}} | }} |
Latest revision as of 10:09, 24 July 2015
Short description: | p@chr12:56080980..56080982, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56080980..56080982, + |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 1.08e-29 | 2 |
future cardiac atrium | 1.08e-29 | 2 |
atrioventricular valve | 1.66e-29 | 2 |
cardiac chamber | 3.66e-20 | 3 |
valve | 4.88e-20 | 3 |
cardiac mesenchyme | 4.88e-20 | 3 |
cardial valve | 4.88e-20 | 3 |
tunica intima | 4.88e-20 | 3 |
heart layer | 4.88e-20 | 3 |
endocardium | 4.88e-20 | 3 |
endocardial cushion | 4.88e-20 | 3 |
presumptive endocardium | 4.88e-20 | 3 |
left cardiac atrium | 5.56e-16 | 1 |
mitral valve | 8.63e-16 | 1 |
tricuspid valve | 1.54e-15 | 1 |
right atrium valve | 1.54e-15 | 1 |
outflow tract of atrium | 1.54e-15 | 1 |
outflow part of right atrium | 1.54e-15 | 1 |
right cardiac atrium | 1.54e-15 | 1 |
small intestine | 1.69e-12 | 4 |
blood vessel layer | 3.88e-09 | 7 |
intestine | 9.90e-08 | 17 |
liver | 2.37e-07 | 19 |
digestive gland | 2.37e-07 | 19 |
liver bud | 2.37e-07 | 19 |