FFCP PHASE1:Hg19::chr12:57592389..57592400,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:57592389..57592400,+ | |||
|description=CAGE_peak_at_chr12:57592389..57592400,+ | |description=CAGE_peak_at_chr12:57592389..57592400,+ | ||
|id=chr12:57592389..57592400,+ | |id=chr12:57592389..57592400,+ | ||
|ontology_enrichment_celltype=CL:0002334!2.04e-07!12;CL:0000055!2.59e-07!180;CL:0000057!5.41e-07!75 | |ontology_enrichment_celltype=CL:0002334!2.04e-07!12;CL:0000055!2.59e-07!180;CL:0000057!5.41e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002580;7.76e-09;3!CL:0002334;5.04e-08;12!CL:0002581;5.77e-07;1!CL:0002591;5.77e-07;1!CL:0002616;5.77e-07;1!CL:0002570;7.04e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.80e-10,76;CL:0000134,8.67e-09,354;CL:0002580,1.10e-08,3;CL:0000048,1.30e-08,427;CL:0002320,1.68e-08,361;CL:0000723,2.09e-08,433;CL:0000034,3.87e-08,441;CL:0002334,5.91e-08,12;CL:0000219,1.70e-07,386;CL:0002616,3.40e-07,1;CL:0002581,5.45e-07,1;CL:0002570,6.49e-07,8;CL:0002591,7.73e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003099;5.77e-07;1!UBERON:0003852;5.77e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;5.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,9.18e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;2.87e-12;2!UBERON:0001013;6.68e-10;14!UBERON:0001443;9.54e-09;11!UBERON:0005705;5.77e-07;1!UBERON:0002426;5.77e-07;1!UBERON:0003831;5.77e-07;1!UBERON:0003898;5.77e-07;1!UBERON:0004830;5.77e-07;1!UBERON:0008193;5.77e-07;1!UBERON:0010912;5.77e-07;1!UBERON:0002514;5.77e-07;1!UBERON:0003457;5.77e-07;1!UBERON:0008907;5.77e-07;1!UBERON:0008001;5.77e-07;1!UBERON:0003830;5.77e-07;1!UBERON:0005175;5.77e-07;1!UBERON:0007213;5.77e-07;1!UBERON:0009891;5.77e-07;1!UBERON:0007914;5.77e-07;1!UBERON:0001774;5.77e-07;1!UBERON:0007375;5.77e-07;1!UBERON:0003323;5.77e-07;1!UBERON:0010258;5.77e-07;1!UBERON:0005253;5.77e-07;1!UBERON:0007842;5.77e-07;1!UBERON:0001103;5.77e-07;1!UBERON:0002397;5.77e-07;1!UBERON:0003113;5.77e-07;1!UBERON:0003277;5.77e-07;1!UBERON:0001709;5.77e-07;1!UBERON:0002244;5.77e-07;1!UBERON:0005620;5.77e-07;1!UBERON:0010364;5.77e-07;1!UBERON:0004288;5.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.62e-12,2;UBERON:0001013,5.10e-10,14;UBERON:0001443,9.86e-09,11;UBERON:0002384,4.11e-08,371;UBERON:0002426,3.82e-07,1;UBERON:0003831,3.82e-07,1;UBERON:0003898,3.82e-07,1;UBERON:0004830,3.82e-07,1;UBERON:0003830,3.82e-07,1;UBERON:0005175,3.82e-07,1;UBERON:0001774,3.82e-07,1;UBERON:0001103,3.82e-07,1;UBERON:0010084,3.82e-07,1 | |||
|phase1_expression=0.181678379270557,3.63970890614671,0.281908808191942,0,3.12872766099101,1.74467704820074,0,0,0.522371256399677,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0.575384784644301,0,0,0.344745680736619,0,0,0,0.545812300115692,0.224723484445085,0.306083892370903,0,0,0,0,0.852449501065388,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,1.50401373190767,0.579386075843295,0,2.43317435151318,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.264818361626438,2.29469296599051,0,0,2.1349799145941,0,0,0,0,0.454072282934794,0,0,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0,0,0,1.25572744982203,0.213557388818567,0.635795703478686,1.80054657650641,0,0.515281080091258,0,0.168776332241266,0.194874010322397,1.51460264546469,0.460249493211497,0.323292113637624,2.4850671476163,0.201504196455281,0.339121184620975,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0.797814349754612,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0,6.32501818449095,0,2.29723871668228,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.35142424497814,0,0,1.03473071292505,0,0,0.173767228936166,0.195801157462741,0.686286847621712,0.206768026122887,0.431428401637234,0,0,0,0.30239029332968,0.248107807818777,1.07423381301644,4.49056151092918,0.768834895534206,0.511707249066704,3.37793234401576,1.48418066444991,0.308419387605311,0.710246901252508,0,0,0.232420756919918,0,0.200506470303285,0,0.229628896329213,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0.193341436584244,0.308097234229289,0,0.137836572484531,0.429680979473094,0.435050081742686,0.255679882248303,0.445160178233687,0,0.192190067365106,0,0.10115778085555,0,0.94443704049192,0.6970372701606,0,0.532306030317022,0.869932992075073,0.18532421910392,0,0,0,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0,0,1.58510321173008,0,0,0.487426979262569,0,0,0.565621727814851,1.13008116620243,0,0,0,0,0,0,0,0.845086807596724,0,0.0982490410131212,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0.921482106297696,0,0.422008249231538,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.361789315876224,0,0.221158519862449,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.179515288819544,0.108647371922008,0,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0.163232808159148,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0.199679000498991,0,0,0,1.08089965062721,0,0,0,0.13480708770837,0,0,0,0.272406812223151,0.321506296930038,0,0,0.2249738915515,0,0.121499113316049,0,0,0,0,0.179287339332845,0,0.714695326373367,0,0,1.62899880526114,0.864221491201268,0.653174720218818,0,0,0.340776043570843,0.113312091520126,0.146552233678082,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0.298509605773748,1.8697064787778,1.10961172300523,0.757612021100357,1.25783950876288,0,0.457680136793847,0.453692771289717,0.310874401165561,0.295710299979268,0,0.449803112163605,0,0.414706207840855,0.265841714557995,0,0.150257608997218,1.52322084867518,0,0,0.214821114084977,0.464033759878494,1.19428766609585,0.800055529326307,0.343395705182793,1.34699795506368,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0.308801447160972,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0,0,0.107824811396682,0.157265941855896,0,0,0.637724760305049,0.123935764259002,0,0.318004350653419,0,0,1.05802783107205,0.3062454773532,0.0642292250964595,0,0.159633859057151,0,0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| ||
|short_description=p@chr12:57592389..57592400,+ | |short_description=p@chr12:57592389..57592400,+ | ||
}} | }} |
Latest revision as of 10:36, 24 July 2015
Short description: | p@chr12:57592389..57592400, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:57592389..57592400, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.80e-10 | 76 |
mesenchymal cell | 8.67e-09 | 354 |
preadipocyte of the breast | 1.10e-08 | 3 |
multi fate stem cell | 1.30e-08 | 427 |
connective tissue cell | 1.68e-08 | 361 |
somatic stem cell | 2.09e-08 | 433 |
stem cell | 3.87e-08 | 441 |
preadipocyte | 5.91e-08 | 12 |
motile cell | 1.70e-07 | 386 |
perirenal adipocyte cell | 3.40e-07 | 1 |
perirenal preadipocyte | 5.45e-07 | 1 |
mesenchymal stem cell of adipose | 6.49e-07 | 8 |
smooth muscle cell of the pulmonary artery | 7.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 1.62e-12 | 2 |
adipose tissue | 5.10e-10 | 14 |
chest | 9.86e-09 | 11 |
connective tissue | 4.11e-08 | 371 |
chest muscle | 3.82e-07 | 1 |
respiratory system muscle | 3.82e-07 | 1 |
skeletal muscle of trunk | 3.82e-07 | 1 |
respiratory system skeletal muscle | 3.82e-07 | 1 |
thoracic segment muscle | 3.82e-07 | 1 |
chest organ | 3.82e-07 | 1 |
muscle of trunk | 3.82e-07 | 1 |
diaphragm | 3.82e-07 | 1 |
future diaphragm | 3.82e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 9.18e-07 | 1 |