FFCP PHASE1:Hg19::chr12:7187749..7187783,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:7187749..7187783,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr12:7187749..7187783,- | |description=CAGE_peak_at_chr12:7187749..7187783,- | ||
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|ontology_enrichment_celltype=CL:0000055!6.83e-09!180;CL:0000057!8.07e-09!75 | |ontology_enrichment_celltype=CL:0000055!6.83e-09!180;CL:0000057!8.07e-09!75 | ||
|ontology_enrichment_celltype_v019=CL:0000214;6.55e-13;3!CL:0000182;1.56e-12;12!CL:0000153;1.56e-09;9!CL:0000447;1.56e-09;9 | |ontology_enrichment_celltype_v019=CL:0000214;6.55e-13;3!CL:0000182;1.56e-12;12!CL:0000153;1.56e-09;9!CL:0000447;1.56e-09;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000214,5.81e-13,3;CL:0000182,1.23e-12,12;CL:0000153,1.33e-09,9;CL:0000447,1.33e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.13e-10;1 | |ontology_enrichment_development_v019=UBERON:0000358;1.13e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;2.62e-10;1 | |ontology_enrichment_disease_v019=DOID:5662;2.62e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5662,2.08e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.89e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!1.89e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.79e-16;9!UBERON:0000042;3.79e-16;9!UBERON:0006915;6.55e-13;3!UBERON:0007616;6.55e-13;3!UBERON:0002217;6.55e-13;3!UBERON:0002018;6.55e-13;3!UBERON:0002107;5.89e-12;19!UBERON:0006925;5.89e-12;19!UBERON:0002134;2.62e-10;1!UBERON:0005208;2.62e-10;1!UBERON:0004145;2.62e-10;1!UBERON:0005946;2.62e-10;1!UBERON:0005965;2.62e-10;1!UBERON:0002078;2.62e-10;1!UBERON:0002423;4.74e-09;25!UBERON:0002365;1.64e-07;31!UBERON:0002330;1.64e-07;31!UBERON:0003688;6.88e-07;6!UBERON:0002358;6.88e-07;6!UBERON:0003684;6.88e-07;6!UBERON:0001178;6.88e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0004457;3.79e-16;9!UBERON:0000042;3.79e-16;9!UBERON:0006915;6.55e-13;3!UBERON:0007616;6.55e-13;3!UBERON:0002217;6.55e-13;3!UBERON:0002018;6.55e-13;3!UBERON:0002107;5.89e-12;19!UBERON:0006925;5.89e-12;19!UBERON:0002134;2.62e-10;1!UBERON:0005208;2.62e-10;1!UBERON:0004145;2.62e-10;1!UBERON:0005946;2.62e-10;1!UBERON:0005965;2.62e-10;1!UBERON:0002078;2.62e-10;1!UBERON:0002423;4.74e-09;25!UBERON:0002365;1.64e-07;31!UBERON:0002330;1.64e-07;31!UBERON:0003688;6.88e-07;6!UBERON:0002358;6.88e-07;6!UBERON:0003684;6.88e-07;6!UBERON:0001178;6.88e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,5.81e-13,3;UBERON:0007616,5.81e-13,3;UBERON:0002217,5.81e-13,3;UBERON:0002018,5.81e-13,3;UBERON:0004457,3.59e-12,12;UBERON:0000042,3.59e-12,12;UBERON:0002107,5.07e-12,19;UBERON:0006925,5.07e-12,19;UBERON:0008836,5.07e-12,19;UBERON:0008835,2.31e-10,22;UBERON:0003894,2.31e-10,22;UBERON:0002134,2.74e-10,1;UBERON:0005208,2.74e-10,1;UBERON:0005946,2.74e-10,1;UBERON:0005965,2.74e-10,1;UBERON:0002078,2.74e-10,1;UBERON:0009854,6.63e-10,23;UBERON:0007499,4.24e-09,25;UBERON:0009497,4.24e-09,25;UBERON:0000015,4.24e-09,25;UBERON:0002423,4.24e-09,25;UBERON:0006235,4.24e-09,25;UBERON:0004161,4.24e-09,25;UBERON:0002417,9.27e-09,60;UBERON:0000916,9.27e-09,60;UBERON:0009856,9.63e-09,26;UBERON:0002365,2.65e-07,31;UBERON:0002330,2.65e-07,31;UBERON:0003688,7.30e-07,6;UBERON:0002358,7.30e-07,6;UBERON:0003684,7.30e-07,6;UBERON:0001178,7.30e-07,6 | |||
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| ||
|short_description=p@chr12:7187749..7187783,- | |short_description=p@chr12:7187749..7187783,- | ||
}} | }} |
Latest revision as of 12:12, 24 July 2015
Short description: | p@chr12:7187749..7187783, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:7187749..7187783, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 5.81e-13 | 3 |
hepatocyte | 1.23e-12 | 12 |
GAG secreting cell | 1.33e-09 | 9 |
carbohydrate secreting cell | 1.33e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 5.81e-13 | 3 |
layer of synovial tissue | 5.81e-13 | 3 |
synovial joint | 5.81e-13 | 3 |
synovial membrane of synovial joint | 5.81e-13 | 3 |
cavity lining | 3.59e-12 | 12 |
serous membrane | 3.59e-12 | 12 |
liver | 5.07e-12 | 19 |
digestive gland | 5.07e-12 | 19 |
liver bud | 5.07e-12 | 19 |
hepatic diverticulum | 2.31e-10 | 22 |
liver primordium | 2.31e-10 | 22 |
tricuspid valve | 2.74e-10 | 1 |
right atrium valve | 2.74e-10 | 1 |
outflow tract of atrium | 2.74e-10 | 1 |
outflow part of right atrium | 2.74e-10 | 1 |
right cardiac atrium | 2.74e-10 | 1 |
digestive tract diverticulum | 6.63e-10 | 23 |
epithelial sac | 4.24e-09 | 25 |
epithelium of foregut-midgut junction | 4.24e-09 | 25 |
anatomical boundary | 4.24e-09 | 25 |
hepatobiliary system | 4.24e-09 | 25 |
foregut-midgut junction | 4.24e-09 | 25 |
septum transversum | 4.24e-09 | 25 |
abdominal segment of trunk | 9.27e-09 | 60 |
abdomen | 9.27e-09 | 60 |
sac | 9.63e-09 | 26 |
exocrine gland | 2.65e-07 | 31 |
exocrine system | 2.65e-07 | 31 |
omentum | 7.30e-07 | 6 |
peritoneum | 7.30e-07 | 6 |
abdominal cavity | 7.30e-07 | 6 |
visceral peritoneum | 7.30e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.08e-10 | 1 |