FFCP PHASE1:Hg19::chr12:94131611..94131622,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000550287,uc001tdb.1_5end | |association_with_transcript=-12bp_to_ENST00000550287,uc001tdb.1_5end | ||
|cluster_id=chr12:94131611..94131622,- | |||
|coexpression_cluster_id=C3344 | |||
|description=CAGE_peak_2_at_ENST00000550287_5end,CAGE_peak_2_at_uc001tdb.1_5end | |description=CAGE_peak_2_at_ENST00000550287_5end,CAGE_peak_2_at_uc001tdb.1_5end | ||
|id=chr12:94131611..94131622,- | |id=chr12:94131611..94131622,- | ||
|ontology_enrichment_celltype=CL:0000214!8.06e-08!3 | |ontology_enrichment_celltype=CL:0000214!8.06e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000214;3.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.28e-19;1!UBERON:0007297;2.17e-10;2!UBERON:0006603;2.39e-10;65!UBERON:0005795;4.50e-08;10!UBERON:0009847;3.06e-07;3!UBERON:0003353;3.06e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.94e-18!115;UBERON:0003135!7.62e-12!11;UBERON:0006947!3.41e-08!3;UBERON:0004054!3.41e-08!3;UBERON:0003101!4.34e-08!22;UBERON:0000079!4.34e-08!22;UBERON:0006915!8.06e-08!3;UBERON:0002018!8.06e-08!3;UBERON:0002217!8.06e-08!3;UBERON:0007616!8.06e-08!3;UBERON:0003133!2.55e-07!48;UBERON:0005156!4.67e-07!59;UBERON:0000990!4.67e-07!59;UBERON:0001000!8.81e-07!1;UBERON:0005352!8.81e-07!1;UBERON:0001301!9.30e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.87e-25;3!UBERON:0004054;4.87e-25;3!UBERON:0001000;2.06e-19;1!UBERON:0001301;2.06e-19;1!UBERON:0005352;2.06e-19;1!UBERON:0005795;4.28e-19;1!UBERON:0005904;4.70e-19;4!UBERON:0003135;1.90e-15;11!UBERON:0003101;1.87e-13;22!UBERON:0000079;1.87e-13;22!UBERON:0001255;2.17e-10;2!UBERON:0001556;2.17e-10;2!UBERON:0004175;2.00e-08;21!UBERON:0000058;3.37e-08;10!UBERON:0006915;3.06e-07;3!UBERON:0007616;3.06e-07;3!UBERON:0002217;3.06e-07;3!UBERON:0002018;3.06e-07;3!UBERON:0005156;5.93e-07;59!UBERON:0000990;5.93e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.82e-25,3;UBERON:0004054,3.82e-25,3;UBERON:0001000,1.56e-19,1;UBERON:0005352,1.56e-19,1;UBERON:0001301,1.88e-19,1;UBERON:0005904,3.92e-19,4;UBERON:0003135,1.85e-15,11;UBERON:0003101,1.81e-13,22;UBERON:0000079,1.81e-13,22;UBERON:0004175,6.03e-12,25;UBERON:0005156,7.03e-11,59;UBERON:0000990,7.03e-11,59;UBERON:0001255,2.27e-10,2;UBERON:0001556,2.27e-10,2;UBERON:0007023,1.12e-09,114;UBERON:0003133,1.65e-09,48;UBERON:0005795,5.39e-08,22;UBERON:0006915,3.35e-07,3;UBERON:0007616,3.35e-07,3;UBERON:0002217,3.35e-07,3;UBERON:0002018,3.35e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26664581178598,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,9.50064336575971,0,0,0,0,0,0,0,0,0,2.17015492401254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.8489263673873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0.067401132980677,0,0,0,0,0,2.76209081994573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0.227662191351298,1.41923792260222,0,0,0,0,0,0,1.56986185701028,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,3.43207650455468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1218035501107,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.733448665097199,1.62758471326295,0,0,0 | |phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26664581178598,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,9.50064336575971,0,0,0,0,0,0,0,0,0,2.17015492401254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.8489263673873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0.067401132980677,0,0,0,0,0,2.76209081994573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0.227662191351298,1.41923792260222,0,0,0,0,0,0,1.56986185701028,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,3.43207650455468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1218035501107,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.733448665097199,1.62758471326295,0,0,0 | ||
|short_description=p2@ENST00000550287,p2@uc001tdb.1 | |short_description=p2@ENST00000550287,p2@uc001tdb.1 | ||
}} | }} |
Latest revision as of 13:42, 24 July 2015
Short description: | p2@ENST00000550287, p2@uc001tdb.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000550287_5end, CAGE_peak_2_at_uc001tdb.1_5end |
Coexpression cluster: | C3344_cervix_anaplastic_bladder_smooth_uterus_colon_prostate |
Association with transcript: | -12bp_to_ENST00000550287, uc001tdb.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.82e-25 | 3 |
internal male genitalia | 3.82e-25 | 3 |
vas deferens | 1.56e-19 | 1 |
spermatic cord | 1.56e-19 | 1 |
epididymis | 1.88e-19 | 1 |
duct of male reproductive system | 3.92e-19 | 4 |
male reproductive organ | 1.85e-15 | 11 |
male organism | 1.81e-13 | 22 |
male reproductive system | 1.81e-13 | 22 |
internal genitalia | 6.03e-12 | 25 |
reproductive structure | 7.03e-11 | 59 |
reproductive system | 7.03e-11 | 59 |
urinary bladder | 2.27e-10 | 2 |
lower urinary tract | 2.27e-10 | 2 |
adult organism | 1.12e-09 | 114 |
reproductive organ | 1.65e-09 | 48 |
embryonic uterus | 5.39e-08 | 22 |
stratified squamous epithelium | 3.35e-07 | 3 |
layer of synovial tissue | 3.35e-07 | 3 |
synovial joint | 3.35e-07 | 3 |
synovial membrane of synovial joint | 3.35e-07 | 3 |