FFCP PHASE1:Hg19::chr13:114631276..114631282,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:114631276..114631282,+ | |||
|coexpression_cluster_id=C2253 | |||
|description=CAGE_peak_at_chr13:114631276..114631282,+ | |||
|id=chr13:114631276..114631282,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.51e-29!180;CL:0000057!2.03e-23!75;CL:0000048!2.23e-16!430;CL:0000723!7.66e-16!436;CL:0000034!3.76e-15!444;CL:0002334!2.71e-13!12;CL:0002371!5.71e-11!591;CL:0000144!3.19e-10!625;CL:0002552!9.47e-10!5;CL:0002320!1.74e-09!365;CL:0000134!1.92e-09!358;CL:0000219!5.19e-09!390;CL:0000680!1.57e-08!57;CL:0000056!1.57e-08!57;CL:0000355!1.57e-08!57;CL:0000548!4.61e-08!679;CL:0000004!4.61e-08!679;CL:0000255!4.61e-08!679;CL:0000012!6.44e-08!682;CL:0002615!8.62e-08!3;CL:0002579!1.27e-07!3;CL:0002580!1.78e-07!3;CL:0002620!4.23e-07!23;CL:0000187!5.09e-07!54;CL:0000192!8.11e-07!42;CL:0000514!8.11e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.20e-24;12!CL:0002615;9.22e-20;3!CL:0002579;2.83e-19;3!CL:0002580;1.03e-18;3!CL:0000136;4.14e-17;13!CL:0000056;1.90e-14;4!CL:0002617;1.51e-13;2!CL:0002559;1.89e-11;5!CL:0000515;2.53e-09;3!CL:0000346;7.59e-09;3!CL:1000428;7.59e-09;3!CL:0000680;1.83e-08;7!CL:0002581;6.58e-08;1!CL:0002616;7.03e-08;1!CL:0000228;3.00e-07;1!CL:0002372;3.00e-07;1!CL:0002599;3.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.91e-24,12;CL:0002615,9.54e-20,3;CL:0002579,2.93e-19,3;CL:0002580,7.85e-19,3;CL:0000136,8.64e-15,15;CL:0000515,1.99e-14,4;CL:0002617,1.18e-13,2;CL:0002559,2.00e-11,5;CL:0000346,7.01e-09,3;CL:1000428,7.01e-09,3;CL:0000048,4.12e-08,427;CL:0000723,6.44e-08,433;CL:0002581,6.59e-08,1;CL:0002616,7.03e-08,1;CL:0000034,1.15e-07,441;CL:0000057,1.42e-07,76;CL:0002599,3.01e-07,1;CL:0000228,3.20e-07,1;CL:0002372,3.20e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000515;1.90e-14;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;3.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!9.54e-14!6;UBERON:0002358!9.54e-14!6;UBERON:0003684!9.54e-14!6;UBERON:0001178!9.54e-14!6;UBERON:0000914!5.92e-10!83;UBERON:0002329!5.92e-10!83;UBERON:0003077!5.92e-10!83;UBERON:0003059!5.92e-10!83;UBERON:0007282!5.92e-10!83;UBERON:0009618!5.92e-10!83;UBERON:0007285!5.92e-10!83;UBERON:0002384!8.14e-10!375;UBERON:0003102!5.64e-09!95;UBERON:0004290!1.12e-08!70;UBERON:0002100!1.97e-08!216;UBERON:0000475!8.33e-08!365;UBERON:0001134!1.19e-07!61;UBERON:0002036!1.19e-07!61;UBERON:0003082!1.19e-07!61;UBERON:0002385!2.96e-07!63;UBERON:0001015!2.96e-07!63;UBERON:0000383!2.96e-07!63;UBERON:0005256!3.75e-07!143;UBERON:0002097!6.63e-07!40;UBERON:0002199!9.32e-07!45;UBERON:0002416!9.32e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.12e-37;6!UBERON:0002358;3.12e-37;6!UBERON:0003684;3.12e-37;6!UBERON:0001178;3.12e-37;6!UBERON:0004457;1.14e-24;9!UBERON:0000042;1.14e-24;9!UBERON:0000310;3.61e-15;10!UBERON:0005406;4.26e-14;2!UBERON:0001443;8.99e-14;11!UBERON:0002073;1.89e-11;5!UBERON:0000412;7.59e-09;3!UBERON:0001992;7.59e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.34e-37,6;UBERON:0002358,3.34e-37,6;UBERON:0003684,3.34e-37,6;UBERON:0001178,3.34e-37,6;UBERON:0004457,2.32e-18,12;UBERON:0000042,2.32e-18,12;UBERON:0000310,2.81e-15,10;UBERON:0005406,4.27e-14,2;UBERON:0001443,7.16e-14,11;UBERON:0002073,2.00e-11,5;UBERON:0005086,2.00e-11,5;UBERON:0000412,7.01e-09,3;UBERON:0001992,7.01e-09,3;UBERON:0002100,3.42e-07,199;UBERON:0009569,8.74e-07,112 | |||
|phase1_expression=2.54349730978779,2.35510576280081,4.93340414335899,3.00219895059391,2.23480547213644,12.2127393374052,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.408308342509787,0.737005903870608,0.103325781175765,1.18800285728205,0.989067717114227,0,0.718618141816238,0,0,1.38532057742091,0.438977620880838,0.919463387397059,1.35214253015937,0,0.538168907066586,0,0.211931901159562,0.300091096084402,0.515262646192195,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,1.19664868234989,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.92972281457866,1.38134921352481,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0.823240336780769,0.65147236858747,0,1.58390374586686,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,0,1.42636905040718,2.89562613335158,0,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0,0,0,0.35142424497814,1.20378439891088,2.27407504055985,0,0,0.553107505625109,0.173767228936166,0,0,0,0,0,0,0,0,2.23297027036899,1.99500565274481,1.40330047216537,2.17836553734692,1.53512174720011,5.30817939773905,25.2310712956485,0,0.710246901252508,0.164254312027618,0,0,0,0,0,0.229628896329213,0.910455840033585,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0.170453254832202,0,0,0,0,0,0.929691098594572,0.94443704049192,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0.190630193923825,2.55897791311334,0,0,0,0.539617372749944,0,0.235624804691373,0,0,0,1.46290121726877,0,0,0.409499734223957,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,1.47373561519682,0,0.354761064070598,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685209623233754,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,1.7046270474758,0.50313580350515,0,0,0,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,6.47368860686952,0,0.727394636810238,0,0,1.99047944349308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:114631276..114631282,+ | |||
}} |
Latest revision as of 14:51, 24 July 2015
Short description: | p@chr13:114631276..114631282, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114631276..114631282, + |
Coexpression cluster: | C2253_Preadipocyte_Adipocyte_leiomyoma_Sertoli_tenocyte_Smooth_Myoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.91e-24 | 12 |
adipocyte of omentum tissue | 9.54e-20 | 3 |
omentum preadipocyte | 2.93e-19 | 3 |
preadipocyte of the breast | 7.85e-19 | 3 |
fat cell | 8.64e-15 | 15 |
skeletal muscle myoblast | 1.99e-14 | 4 |
adipocyte of breast | 1.18e-13 | 2 |
hair follicle cell | 2.00e-11 | 5 |
hair follicle dermal papilla cell | 7.01e-09 | 3 |
stem cell of epidermis | 7.01e-09 | 3 |
multi fate stem cell | 4.12e-08 | 427 |
somatic stem cell | 6.44e-08 | 433 |
perirenal preadipocyte | 6.59e-08 | 1 |
perirenal adipocyte cell | 7.03e-08 | 1 |
stem cell | 1.15e-07 | 441 |
fibroblast | 1.42e-07 | 76 |
smooth muscle cell of the esophagus | 3.01e-07 | 1 |
multinucleate cell | 3.20e-07 | 1 |
myotube | 3.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.34e-37 | 6 |
peritoneum | 3.34e-37 | 6 |
abdominal cavity | 3.34e-37 | 6 |
visceral peritoneum | 3.34e-37 | 6 |
cavity lining | 2.32e-18 | 12 |
serous membrane | 2.32e-18 | 12 |
breast | 2.81e-15 | 10 |
perirenal fat | 4.27e-14 | 2 |
chest | 7.16e-14 | 11 |
hair follicle | 2.00e-11 | 5 |
hair follicle placode | 2.00e-11 | 5 |
dermal papilla | 7.01e-09 | 3 |
papillary layer of dermis | 7.01e-09 | 3 |
trunk | 3.42e-07 | 199 |
subdivision of trunk | 8.74e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.21e-07 | 1 |