FFCP PHASE1:Hg19::chr13:24246893..24246939,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:24246893..24246939,+ | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_at_chr13:24246893..24246939,+ | |description=CAGE_peak_at_chr13:24246893..24246939,+ | ||
|id=chr13:24246893..24246939,+ | |id=chr13:24246893..24246939,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;2.66e-18;1!CL:0000164;2.66e-18;1!CL:0000502;2.66e-18;1!CL:0000172;2.66e-18;1!CL:0000173;2.66e-18;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.66e-18,1;CL:0000164,2.66e-18,1;CL:0000502,2.66e-18,1;CL:0000172,2.66e-18,1;CL:0000173,2.66e-18,1;CL:0002351,2.66e-18,1 | |||
|ontology_enrichment_development_v019=CL:0002351;2.66e-18;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;2.66e-18;1!DOID:114;1.57e-09;2!DOID:3905;2.37e-08;9!DOID:4556;6.14e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.66e-18,1;DOID:114,1.71e-09,2;DOID:3905,2.20e-08,9;DOID:4556,6.14e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0005174!1.15e-07!5;UBERON:0001137!1.15e-07!5 | |ontology_enrichment_uberon=UBERON:0005174!1.15e-07!5;UBERON:0001137!1.15e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.38e-33;2!UBERON:0002426;4.83e-18;1!UBERON:0003831;4.83e-18;1!UBERON:0003898;4.83e-18;1!UBERON:0004830;4.83e-18;1!UBERON:0003830;4.83e-18;1!UBERON:0005175;4.83e-18;1!UBERON:0001774;4.83e-18;1!UBERON:0001103;4.83e-18;1!UBERON:0003296;2.38e-17;4!UBERON:0010133;2.38e-17;4!UBERON:0001894;2.46e-10;7!UBERON:0005090;1.07e-09;2!UBERON:0001630;1.07e-09;2!UBERON:0001723;7.08e-07;3!UBERON:0001033;7.08e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,7.10e-34,2;UBERON:0002426,4.44e-18,1;UBERON:0003831,4.44e-18,1;UBERON:0003898,4.44e-18,1;UBERON:0004830,4.44e-18,1;UBERON:0003830,4.44e-18,1;UBERON:0005175,4.44e-18,1;UBERON:0001774,4.44e-18,1;UBERON:0001103,4.44e-18,1;UBERON:0010084,4.44e-18,1;UBERON:0003296,1.71e-17,4;UBERON:0010133,1.71e-17,4;UBERON:0001894,2.04e-10,7;UBERON:0006222,2.04e-10,7;UBERON:0005090,1.03e-09,2;UBERON:0001630,1.03e-09,2;UBERON:0001723,7.28e-07,3;UBERON:0001033,7.28e-07,3;UBERON:0010056,7.28e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.74259811776028,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.600952235626387,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.714889968290738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0,0,0,0.229628896329213,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.534192213880424,0,0,0.127612712494584,0,0,0,0.6970372701606,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0.272999822815972,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,5.27372397525631,0,0,0,0.251932747854276,0.102268682502155,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,2.40773294189637,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0,0,0,1.28767814440971,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,6.27505687664957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0.295710299979268,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,1.82089681270989,1.59363533945908,0,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,1.16969731731053,1.19370465096821,0,0,0,1.66059127923341,0,0,1.41095188908457,0,18.3827706739268,0.392616934229891,0,0.4226557275834,0,0.375935671919414,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0.404234377916439,0,2.39563310759697,0,0.932388670104793,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.74259811776028,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.600952235626387,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.714889968290738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0,0,0,0.229628896329213,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.534192213880424,0,0,0.127612712494584,0,0,0,0.6970372701606,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0.272999822815972,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,5.27372397525631,0,0,0,0.251932747854276,0.102268682502155,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,2.40773294189637,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0,0,0,1.28767814440971,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,6.27505687664957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0.295710299979268,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,1.82089681270989,1.59363533945908,0,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,1.16969731731053,1.19370465096821,0,0,0,1.66059127923341,0,0,1.41095188908457,0,18.3827706739268,0.392616934229891,0,0.4226557275834,0,0.375935671919414,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0.404234377916439,0,2.39563310759697,0,0.932388670104793,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr13:24246893..24246939,+ | |short_description=p@chr13:24246893..24246939,+ | ||
}} | }} |
Latest revision as of 15:08, 24 July 2015
Short description: | p@chr13:24246893..24246939, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:24246893..24246939, + |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.66e-18 | 1 |
enteroendocrine cell | 2.66e-18 | 1 |
type D enteroendocrine cell | 2.66e-18 | 1 |
somatostatin secreting cell | 2.66e-18 | 1 |
pancreatic D cell | 2.66e-18 | 1 |
progenitor cell of endocrine pancreas | 2.66e-18 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 7.10e-34 | 2 |
chest muscle | 4.44e-18 | 1 |
respiratory system muscle | 4.44e-18 | 1 |
skeletal muscle of trunk | 4.44e-18 | 1 |
respiratory system skeletal muscle | 4.44e-18 | 1 |
thoracic segment muscle | 4.44e-18 | 1 |
chest organ | 4.44e-18 | 1 |
muscle of trunk | 4.44e-18 | 1 |
diaphragm | 4.44e-18 | 1 |
future diaphragm | 4.44e-18 | 1 |
gland of diencephalon | 1.71e-17 | 4 |
neuroendocrine gland | 1.71e-17 | 4 |
diencephalon | 2.04e-10 | 7 |
future diencephalon | 2.04e-10 | 7 |
muscle structure | 1.03e-09 | 2 |
muscle organ | 1.03e-09 | 2 |
tongue | 7.28e-07 | 3 |
gustatory system | 7.28e-07 | 3 |
future tongue | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.66e-18 | 1 |
heart disease | 1.71e-09 | 2 |
lung carcinoma | 2.20e-08 | 9 |
lung large cell carcinoma | 6.14e-07 | 3 |