FFCP PHASE1:Hg19::chr13:32802694..32802724,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:32802694..32802724,+ | |||
|description=CAGE_peak_at_chr13:32802694..32802724,+ | |description=CAGE_peak_at_chr13:32802694..32802724,+ | ||
|id=chr13:32802694..32802724,+ | |id=chr13:32802694..32802724,+ | ||
|ontology_enrichment_celltype=CL:0002563!6.36e-08!4;CL:0000708!9.60e-07!3 | |ontology_enrichment_celltype=CL:0002563!6.36e-08!4;CL:0000708!9.60e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002553;2.06e-15;1!CL:0002253;1.34e-08;2!CL:1000487;2.31e-08;2!CL:0000082;2.51e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.78e-15,1;CL:0002253,1.39e-08,2;CL:1000487,2.67e-08,2;CL:0000082,2.59e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!1.24e-07!14 | |ontology_enrichment_disease=DOID:3119!1.24e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3119;6.05e-10;14!DOID:1324;3.85e-09;15!DOID:1325;3.96e-09;7!DOID:3904;3.96e-09;7!DOID:0050615;1.33e-08;16!DOID:3910;1.34e-08;2!DOID:3905;2.72e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,6.24e-10,14;DOID:1324,4.01e-09,15;DOID:1325,4.39e-09,7;DOID:3904,4.39e-09,7;DOID:3910,1.29e-08,2;DOID:0050615,1.38e-08,16;DOID:3905,2.95e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001242!6.36e-08!4;UBERON:0001262!6.36e-08!4;UBERON:0004786!6.36e-08!4;UBERON:0004808!6.36e-08!4;UBERON:0001277!6.36e-08!4;UBERON:0003210!9.60e-07!3 | |ontology_enrichment_uberon=UBERON:0001242!6.36e-08!4;UBERON:0001262!6.36e-08!4;UBERON:0004786!6.36e-08!4;UBERON:0004808!6.36e-08!4;UBERON:0001277!6.36e-08!4;UBERON:0003210!9.60e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.34e-08;2!UBERON:0002173;1.34e-08;2!UBERON:0002186;1.34e-08;2!UBERON:0000007;2.31e-08;2!UBERON:0004802;2.51e-07;19!UBERON:0000115;2.51e-07;19!UBERON:0001155;2.72e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.29e-08,2;UBERON:0002173,1.29e-08,2;UBERON:0002186,1.29e-08,2;UBERON:0000007,1.86e-08,2;UBERON:0004802,2.59e-07,19;UBERON:0000115,2.59e-07,19;UBERON:0001155,3.14e-07,9 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0.448524337381443,2.1798003441664,0.22001485746285,0.904902010304444,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0.803701137152247,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,1.07923474549989,0,0.117812402345686,0.202182481573316,0,0,0,0,0,1.22849920267187,0.565621727814851,0,0,0,0,0,0.655894752046633,0,0,0,0.573645408816206,0.196498082026242,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0.481764225311099,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,7.10340367016033,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0,0,0.755798243562828,0,0,0.622079175323615,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,1.64875668123352,0,0,0,0,0,0,0,0,0,0,0,7.06765357169704,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0.547364367646998,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0.114536596165916,2.05913997434357,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0.936669811613763,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0,1.5652351854352,0,0,0,0,0.107410557042488,0,1.99047944349308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0.3062454773532,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,1.82089681270989,0.227662191351298,0,0,0,0.475788130837822,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0,0,0,1.20770274853339,0,0,13.1688842981226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0.448524337381443,2.1798003441664,0.22001485746285,0.904902010304444,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0.803701137152247,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,1.07923474549989,0,0.117812402345686,0.202182481573316,0,0,0,0,0,1.22849920267187,0.565621727814851,0,0,0,0,0,0.655894752046633,0,0,0,0.573645408816206,0.196498082026242,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0.481764225311099,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,7.10340367016033,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0,0,0.755798243562828,0,0,0.622079175323615,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,1.64875668123352,0,0,0,0,0,0,0,0,0,0,0,7.06765357169704,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0.547364367646998,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0.114536596165916,2.05913997434357,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0.936669811613763,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0,1.5652351854352,0,0,0,0,0.107410557042488,0,1.99047944349308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0.3062454773532,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,1.82089681270989,0.227662191351298,0,0,0,0.475788130837822,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0,0,0,1.20770274853339,0,0,13.1688842981226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr13:32802694..32802724,+ | |short_description=p@chr13:32802694..32802724,+ | ||
}} | }} |
Latest revision as of 15:39, 24 July 2015
Short description: | p@chr13:32802694..32802724, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:32802694..32802724, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.78e-15 | 1 |
epithelial cell of large intestine | 1.39e-08 | 2 |
smooth muscle cell of prostate | 2.67e-08 | 2 |
epithelial cell of lung | 2.59e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.29e-08 | 2 |
alveolar duct | 1.29e-08 | 2 |
bronchiole | 1.29e-08 | 2 |
pituitary gland | 1.86e-08 | 2 |
respiratory tract epithelium | 2.59e-07 | 19 |
lung epithelium | 2.59e-07 | 19 |
colon | 3.14e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 6.24e-10 | 14 |
lung cancer | 4.01e-09 | 15 |
bronchus cancer | 4.39e-09 | 7 |
bronchogenic carcinoma | 4.39e-09 | 7 |
lung adenocarcinoma | 1.29e-08 | 2 |
respiratory system cancer | 1.38e-08 | 16 |
lung carcinoma | 2.95e-07 | 9 |