FFCP PHASE1:Hg19::chr13:38144712..38144754,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:38144712..38144754,+ | |||
|coexpression_cluster_id=C231 | |||
|description=CAGE_peak_at_chr13:38144712..38144754,+ | |||
|id=chr13:38144712..38144754,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.64e-23!180;CL:0000057!1.48e-17!75;CL:0002334!7.73e-15!12;CL:0000680!7.45e-12!57;CL:0000056!7.45e-12!57;CL:0000355!7.45e-12!57;CL:0000187!4.56e-11!54;CL:0000048!5.13e-10!430;CL:0000723!7.80e-10!436;CL:0000183!2.22e-09!59;CL:0000034!4.29e-09!444;CL:0000393!4.43e-09!60;CL:0000211!4.43e-09!60;CL:0002570!6.32e-07!8;CL:0000222!8.79e-07!119;CL:0002494!9.58e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.23e-24;12!CL:0002580;4.94e-09;3!CL:0002579;8.98e-09;3!CL:0002582;7.38e-08;3!CL:0002570;1.96e-07;8!CL:0002548;5.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.77e-24,12;CL:0000057,2.11e-18,76;CL:0000048,3.05e-09,427;CL:0002580,4.47e-09,3;CL:0000723,6.66e-09,433;CL:0002579,1.17e-08,3;CL:0000034,1.82e-08,441;CL:0002582,5.21e-08,3;CL:0002570,2.22e-07,8;CL:0002548,3.54e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.78e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!2.18e-11!61;UBERON:0002036!2.18e-11!61;UBERON:0003082!2.18e-11!61;UBERON:0002385!1.03e-10!63;UBERON:0001015!1.03e-10!63;UBERON:0000383!1.03e-10!63;UBERON:0000914!2.41e-10!83;UBERON:0002329!2.41e-10!83;UBERON:0003077!2.41e-10!83;UBERON:0003059!2.41e-10!83;UBERON:0007282!2.41e-10!83;UBERON:0009618!2.41e-10!83;UBERON:0007285!2.41e-10!83;UBERON:0004290!2.55e-09!70;UBERON:0000486!1.14e-07!82;UBERON:0000948!2.14e-07!24;UBERON:0005498!2.14e-07!24;UBERON:0004140!2.14e-07!24;UBERON:0009881!2.14e-07!24;UBERON:0004141!2.14e-07!24;UBERON:0003084!2.14e-07!24;UBERON:0007005!2.14e-07!24;UBERON:0004139!2.14e-07!24;UBERON:0004291!2.14e-07!24;UBERON:0004872!4.79e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.60e-07;6!UBERON:0002358;4.60e-07;6!UBERON:0003684;4.60e-07;6!UBERON:0001178;4.60e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.82e-07,6;UBERON:0002358,5.82e-07,6;UBERON:0003684,5.82e-07,6;UBERON:0001178,5.82e-07,6 | |||
|phase1_expression=1.81678379270557,0.428201047781966,0.986680828671798,0,1.34088328328186,0,0,0,0,0,0,0,0,0.123766352960047,0,1.34465029290355,0,0,1.46379839637152,0,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,1.66221330396589,2.1686349143074,0.50133791063589,0.144846518960824,0,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51699661725944,0.550236083880135,0,0,0,0,0,0,0,0,3.24056779152704,0,0,0,0,0,0,0,0,0,15.9031024542502,2.27934920996244,3.97227542439656,4.87622255272983,0.709336764396714,0,3.20246987189115,2.96001058100592,0,1.88594940897563,7.5192475432191,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.673344455816265,0,0,0.438977620880838,0.919463387397059,0.150238058906597,7.48652408856139,0.358779271377724,1.06778694409284,1.48352330811693,0.600182192168805,0.515262646192195,1.28820270022815,0,0.337552664482532,0.0974370051611986,2.01947019395292,1.74894807420369,0,2.13005755509969,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36106460970222,0,0.845302752556,1.32969058292435,2.08014873822732,0,0,0,0.142977993658148,0,0,1.30294473717494,0.710783897485092,0,37.9813615095078,0.871533458600294,9.19751518874925,0,0,0,2.39624855491583,2.29723871668228,0,1.30303176000821,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44709670745502,4.46072471992904,2.36553622550902,0,0,0,2.0694614258501,1.32845119707087,0,0.347534457872331,0,0,0,0,0,0,0,0,9.17998888929474,5.83155498494637,3.92924132206303,5.50998341799514,2.04682899626681,6.75586468803151,1.48418066444991,0.771048469013278,3.72879623157567,1.8067974323038,2.07701771673448,2.78904908303902,0,0,0,1.37777337797528,0.910455840033585,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,1.64340221096607,1.3864375540318,0.307007349452259,0.275673144969061,0.322260734604821,0.145016693914229,0.340906509664404,8.72513949338026,0.330569830721956,0,0,0,0,1.5740617341532,0,0.308033580176089,0,0,0.37064843820784,0.715624433709956,0,0.949138274156178,0.190630193923825,0,0,0,0,0.719489830333259,2.19629623788844,0.706874414074119,0.404364963146632,0,0.421258456238981,0,2.43713489631284,0,1.63799893689583,7.21167702963935,0,0,3.3171948762061,0.438450885253763,0,0,0.608731130888112,0,0,0.286822704408103,0.0982490410131212,0,0,0.211107635297664,0,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0,0,0.268733889946905,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,1.40227985908335,2.21922344601045,0.189403005275089,0,0,0.228840068396924,0,0.310874401165561,0.295710299979268,0,1.34940933649081,1.24210365501008,0.829412415681711,2.39257543102195,4.17396049449387,1.80309130796662,6.85449381903832,0.406870733204662,0.727394636810238,0.966695013382396,0,0.398095888698616,0,4.12074846219351,2.35724642136143,0,0,0.214441591374926,0,5.44094221229454,0,0.244736704506468,0.358177682162975,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,2.29326894192489,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86203915588077,0,0,6.70084293012299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,1.14640342257068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,2.32482850736251,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,5.57992527250127,0.924351257262837,3.46101249699031,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,1.66645102024618,0,0.186224142887574,0,0,0.202117188958219,0,0.684466602170562,0,0.215166616178029,0.665320713092027,0,0.106727345877715,0,0,0,0,1.22068853494722,0,0,0 | |||
|short_description=p@chr13:38144712..38144754,+ | |||
}} |
Latest revision as of 15:52, 24 July 2015
Short description: | p@chr13:38144712..38144754, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38144712..38144754, + |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.77e-24 | 12 |
fibroblast | 2.11e-18 | 76 |
multi fate stem cell | 3.05e-09 | 427 |
preadipocyte of the breast | 4.47e-09 | 3 |
somatic stem cell | 6.66e-09 | 433 |
omentum preadipocyte | 1.17e-08 | 3 |
stem cell | 1.82e-08 | 441 |
visceral preadipocyte | 5.21e-08 | 3 |
mesenchymal stem cell of adipose | 2.22e-07 | 8 |
cardiac fibroblast | 3.54e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.82e-07 | 6 |
peritoneum | 5.82e-07 | 6 |
abdominal cavity | 5.82e-07 | 6 |
visceral peritoneum | 5.82e-07 | 6 |