FFCP PHASE1:Hg19::chr13:41177487..41177491,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:41177487..41177491,- | |||
|description=CAGE_peak_at_chr13:41177487..41177491,- | |||
|id=chr13:41177487..41177491,- | |||
|ontology_enrichment_celltype=CL:0000542!3.18e-17!53;CL:0000051!3.18e-17!53;CL:0000838!5.62e-17!52;CL:0002087!4.91e-13!119;CL:0000738!4.02e-12!140;CL:0000791!2.09e-11!18;CL:0000789!2.09e-11!18;CL:0002420!2.09e-11!18;CL:0002419!2.09e-11!18;CL:0000790!2.09e-11!18;CL:0002031!2.64e-10!124;CL:0000236!1.08e-09!14;CL:0000084!8.55e-09!25;CL:0000827!8.55e-09!25;CL:0000945!2.26e-07!24;CL:0000826!2.26e-07!24;CL:0000625!8.77e-07!11;CL:0002393!9.69e-07!9;CL:0002397!9.69e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.17e-16;13!CL:0000791;7.22e-16;18!CL:0000789;7.22e-16;18!CL:0002419;7.22e-16;18!CL:0000623;8.52e-15;3!CL:0000542;1.28e-13;53!CL:0000624;4.52e-13;6!CL:0000084;4.70e-11;25!CL:0000945;1.88e-08;24!CL:0002393;3.33e-07;6!CL:0002397;3.33e-07;6!CL:0000625;3.80e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.10e-25,52;CL:0000542,2.52e-24,53;CL:0000051,2.52e-24,53;CL:0002087,9.16e-16,115;CL:0000791,1.02e-15,18;CL:0000789,1.02e-15,18;CL:0002420,1.02e-15,18;CL:0002419,1.02e-15,18;CL:0000790,1.02e-15,18;CL:0000236,3.36e-15,14;CL:0002031,7.25e-15,120;CL:0000623,1.11e-14,3;CL:0000825,1.11e-14,3;CL:0000738,6.44e-14,136;CL:0000624,7.10e-13,6;CL:0000084,5.97e-11,25;CL:0000827,5.97e-11,25;CL:0000037,2.96e-10,168;CL:0002032,8.69e-10,161;CL:0000837,8.69e-10,161;CL:0000988,1.82e-09,177;CL:0000945,1.78e-08,24;CL:0000826,1.78e-08,24;CL:0000625,3.96e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;7.22e-16;18!CL:0000051;1.28e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-12!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;2.25e-10;2!UBERON:0003978;3.48e-07;3!UBERON:0000946;3.48e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,3.86e-10,2;UBERON:0003978,4.97e-07,3;UBERON:0009751,4.97e-07,3;UBERON:0000946,4.97e-07,3;UBERON:0002523,4.97e-07,3;UBERON:0005983,4.97e-07,3;UBERON:0002165,4.97e-07,3;UBERON:0002062,4.97e-07,3;UBERON:0007280,4.97e-07,3 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.376627918784408,0,0,0.0787107813136792,0.393364276848904,0.767658796194425,0.619264493264304,0,0,0,0.852139206383318,0.284338464974843,0,1.66198622559563,1.60435557976113,1.73608696572681,0.447830948479849,0,0,0.145398238779565,0,0,0.464858073811369,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0.425208599930087,0.419317291016752,0.112328631146495,0.150176892841506,0,0.570025487482497,0.39783335439818,0.547992461293902,1.75996244461323,2.18455444504853,0.889509253863555,0.853460445133014,0.800791974072025,0.574752439954483,1.32208974556972,1.90810750907073,1.1384259382189,2.34894875748376,2.6759125968766,1.32171328579026,0.560508562981536,0.263384084775077,5.50787356318733,4.32311839024081,2.05601498999509,0.334372990781356,0.651844533267181,0.473447805734733,0,0.334231370655521,1.17842362989935,1.99380505125259,1.35401931882508,0.25618263945135,0.650296737799391,0.986627427622057,0.829050053357545,0,0,0.802622484269139,0,0.566546713487831,0.766440987203842,0.34362744548263,0.253019692019503,0.637130828648193,0.651083453856419,0.950452044448374,0.150575119077773,0.127986611154418,1.24930726552346,0,0.821127996921047,2.82249440514625,5.88368430723716,4.34473211648397,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0,0,0.392937226493138,0,0,0.97364218096405,1.21890816109487,0.26591592103773,0.238490624305342,0,0.371457501329565,0.198762407366705,0,0.694281003215189,0,0,0,0,1.29208379584664,1.77883131343355,0.33472061276467,0,0,0,0,0,1.25019619597712,0.898117490504679,0.450445921933289,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0.397589304964456,0.116193942869518,0,0,1.82488679537915,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0.738155454624648,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0.492434012174795,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,1.18218456121156,3.88129634747131,2.56686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.620304078368662,3.01999881146064,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.330037999682352,0,0,0,0,0,0,0.137836572484531,0.322260734604821,0,0.255679882248303,0.0890320356467374,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,1.48863347743867,0,0.571890581771475,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0.398495976502139,0.828851746593443,0.755798243562828,0.20453736500431,0.123084805461069,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0,0,0.173624994933292,0,0.844175070377856,0,0.331737779793674,0,0.219385397153973,0,0,0.769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.530745387020035,0.611030144933625,0.889563386041866,0,0.104421949505455,0.202203398942031,0,0.234264445725339,0.364909578431332,0,0,0.789168805698781,0,0,0.442306057399416,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.52418000472609,0,0,0.0730893170861856,0,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0.0633107959558787,0.586654148204409,0,0.426905989478705,0,0.144090417154106,0,0.343189995723929,0.14405479798815,0.124252535565433,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0.262887354279314,1.11712960508902,0.687481272035051,3.58936512288407,0,0,0.223171457441873,0.335917362433631,0.360299883542404,0,0,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0.136203406111576,0.482259445395058,0,0.415440338029185,0,2.32140586367385,0.182248669974074,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.387848869084652,0.66116300871345,0.171086837884329,0,0.320362237703084,0,0.414239055347196,0.496166021811951,0,0,0,3.80812462358632,1.2534494701135,0.612691153526923,2.95085367638824,0,0,0,0,0,0.110929051536852,0,0.415045904808692,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.265729680626726,0,0,0,0.211312123358627,0.19998739585493,0.106691729694141,0.344429959321631,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0.212574920101683,0.371807292777007,0,0,0.157723490002507,0,0,0,0.128458450192919,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0.11796972334774,0.366857197043358,0,0,0,0.596748666348824,0.225630985047772,0,0.781514011233092,0,0,0.147856086217045,0.135075169236789,0.781078098613847,0,0,0,0,2.97726707033577,0.175871244359621,0.255524855279191,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0,0,0,0.942693539496011,0,0,0,0,0.0714765441766563,0.316027223465453,0.348724276104376,0.173858272302579,0,0.207216164163037,0.3414369541879,0.691259661814092,0,0,0,0.423387050190929,0.22910686854405,0.31020638566432,0.955538938977433,0.111855431797792,0,0,3.23714418593947,0.513314034281235,1.1598144313382,0,0,0,0,0,0.549702583727146,0.150962843566674,0.308696632431779,0,0.470317296361523,0,0.235676547101626,0.392616934229891,0.297046400327086,0,0,0.0939839179798536,0,0.199882311849858,0.178553938605658,0,0,0.730336388246517,0.917458566809082,0.430018749454354,0.157771562193185,0,0.436350690340377,2.1161073620616,0,0,0,0,0.109265571963696,0.253397002022874,0,0,0,0,0.151557396436479,0,0.829169439458779,0.310298987585686,0.852935927603924,0.952257725854961,0,0,0,0.12729431655633,2.82964064541507,0.435433495793923,0,0.26940821205835,0.358611026963382,0.332660356546013,0.0814032686109745,0,0,0,0,1.34465588601153,0.813792356631477,0.665756774185513,0.603821380773079,0 | |||
|short_description=p@chr13:41177487..41177491,- | |||
}} |
Latest revision as of 15:57, 24 July 2015
Short description: | p@chr13:41177487..41177491, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:41177487..41177491, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.10e-25 | 52 |
lymphocyte | 2.52e-24 | 53 |
common lymphoid progenitor | 2.52e-24 | 53 |
nongranular leukocyte | 9.16e-16 | 115 |
mature alpha-beta T cell | 1.02e-15 | 18 |
alpha-beta T cell | 1.02e-15 | 18 |
immature T cell | 1.02e-15 | 18 |
mature T cell | 1.02e-15 | 18 |
immature alpha-beta T cell | 1.02e-15 | 18 |
B cell | 3.36e-15 | 14 |
hematopoietic lineage restricted progenitor cell | 7.25e-15 | 120 |
natural killer cell | 1.11e-14 | 3 |
pro-NK cell | 1.11e-14 | 3 |
leukocyte | 6.44e-14 | 136 |
CD4-positive, alpha-beta T cell | 7.10e-13 | 6 |
T cell | 5.97e-11 | 25 |
pro-T cell | 5.97e-11 | 25 |
hematopoietic stem cell | 2.96e-10 | 168 |
hematopoietic oligopotent progenitor cell | 8.69e-10 | 161 |
hematopoietic multipotent progenitor cell | 8.69e-10 | 161 |
hematopoietic cell | 1.82e-09 | 177 |
lymphocyte of B lineage | 1.78e-08 | 24 |
pro-B cell | 1.78e-08 | 24 |
CD8-positive, alpha-beta T cell | 3.96e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 3.86e-10 | 2 |
valve | 4.97e-07 | 3 |
cardiac mesenchyme | 4.97e-07 | 3 |
cardial valve | 4.97e-07 | 3 |
tunica intima | 4.97e-07 | 3 |
heart layer | 4.97e-07 | 3 |
endocardium | 4.97e-07 | 3 |
endocardial cushion | 4.97e-07 | 3 |
presumptive endocardium | 4.97e-07 | 3 |