FFCP PHASE1:Hg19::chr13:43451842..43451845,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:43451842..43451845,+ | |||
|description=CAGE_peak_at_chr13:43451842..43451845,+ | |description=CAGE_peak_at_chr13:43451842..43451845,+ | ||
|id=chr13:43451842..43451845,+ | |id=chr13:43451842..43451845,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.38e-11!254 | |ontology_enrichment_celltype=CL:0000066!3.38e-11!254 | ||
|ontology_enrichment_celltype_v019=CL:0002336;8.72e-18;1!CL:0002261;8.72e-18;1!CL:0002170;8.72e-18;1!CL:0002363;1.44e-09;2!CL:0002076;4.57e-09;42!CL:0002251;5.03e-08;20!CL:0000322;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002336,1.22e-17,1;CL:0002261,1.22e-17,1;CL:0002170,1.22e-17,1;CL:0002076,6.80e-10,42;CL:0002363,1.86e-09,2;CL:0000008,1.86e-09,2;CL:0002251,5.29e-08,20;CL:0000223,3.67e-07,58;CL:0000322,7.28e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000008;1.44e-09;2!UBERON:0008814;1.44e-09;2!UBERON:0010056;1.44e-09;2 | |||
|ontology_enrichment_disease=DOID:162!8.45e-15!235;DOID:14566!1.01e-14!239;DOID:305!5.02e-14!106;DOID:0050687!1.70e-12!143 | |||
|ontology_enrichment_disease_v019=DOID:3908;2.66e-14;5!DOID:1749;2.53e-11;14!DOID:1909;9.06e-10;2!DOID:3910;1.44e-09;2!DOID:3905;2.33e-08;9!DOID:4556;6.32e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3908,2.11e-14,5;DOID:1749,2.45e-11,14;DOID:1909,9.46e-10,2;DOID:3910,1.12e-09,2;DOID:3905,2.05e-08,9;DOID:4556,6.14e-07,3;DOID:0050687,7.67e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000488!2.22e-07!4;UBERON:0002203!3.17e-07!6;UBERON:0001768!3.17e-07!6 | |ontology_enrichment_uberon=UBERON:0000488!2.22e-07!4;UBERON:0002203!3.17e-07!6;UBERON:0001768!3.17e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0006562;1.44e-09;2!UBERON:0004903;1.44e-09;2!UBERON:0003566;1.44e-09;2!UBERON:0001777;1.44e-09;2!UBERON:0002173;1.44e-09;2!UBERON:0002186;1.44e-09;2!UBERON:0001723;8.62e-07;3!UBERON:0004821;8.62e-07;3!UBERON:0007499;8.62e-07;3!UBERON:0003215;8.62e-07;3!UBERON:0010368;8.62e-07;3!UBERON:0009911;8.62e-07;3!UBERON:0002299;8.62e-07;3!UBERON:0001033;8.62e-07;3!UBERON:0006524;8.62e-07;3!UBERON:0008874;8.62e-07;3!UBERON:0002169;8.62e-07;3!UBERON:0004894;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.12e-09,2;UBERON:0002173,1.12e-09,2;UBERON:0002186,1.12e-09,2;UBERON:0003566,1.86e-09,2;UBERON:0001777,1.86e-09,2;UBERON:0006562,6.35e-07,11;UBERON:0004821,7.28e-07,3;UBERON:0003215,7.28e-07,3;UBERON:0010368,7.28e-07,3;UBERON:0009911,7.28e-07,3;UBERON:0002299,7.28e-07,3;UBERON:0006524,7.28e-07,3;UBERON:0008874,7.28e-07,3;UBERON:0002169,7.28e-07,3;UBERON:0004894,7.28e-07,3;UBERON:0001723,8.15e-07,3;UBERON:0001033,8.15e-07,3;UBERON:0010056,8.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0.201057944823262,1.38882667737794,0,1.03993478527958,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.348631135379878,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,1.53135254993501,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.288666338176536,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0.539210106883961,0,0,0.0986434056369336,0,0,0,0,0,0,0.61221999997337,0,1.4793148277115,1.5255219017566,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,1.50323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0.942776138467182,0.135904206073614,0,0.203996435272644,0.288950589901519,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0.338693328263138,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0.316801009558219,2.51002275065983,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,2.42638588066636,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0.465788870628778,0.414706207840855,0,0,0.300515217994437,0,0,0,0.429642228169954,0,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0.168942440653073,1.02496607435179,0,0,0,0,0,0,0.655219697692825,0.737318726261158,0,0.19998739585493,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5018336599544,0,0.690359926060101,0,0,0,0,0,0.163771917510097,0.739280431085226,0,0,0,0,0,0,0,0,1.40538670403555,0,0,0,0,0,0.115233987555779,0,0,0,0.354581522651905,0.111231401892069,0,0,0.280272163313789,0,0.215927591218621,0,0.0714765441766563,0,0.23248285073625,0,0,0,0,0,0,0.118332000730565,0,0,0.9164274741762,0,0,0.223710863595585,0,0.243835849964539,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892769693028288,5.64631794745107,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0.506794004045748,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.224263725161227,0,0,0,0,0,0,0,0.651226148887796,0,0,0.449126010532934,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0.201057944823262,1.38882667737794,0,1.03993478527958,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.348631135379878,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,1.53135254993501,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.288666338176536,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0.539210106883961,0,0,0.0986434056369336,0,0,0,0,0,0,0.61221999997337,0,1.4793148277115,1.5255219017566,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,1.50323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0.942776138467182,0.135904206073614,0,0.203996435272644,0.288950589901519,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0.338693328263138,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0.316801009558219,2.51002275065983,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,2.42638588066636,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0.465788870628778,0.414706207840855,0,0,0.300515217994437,0,0,0,0.429642228169954,0,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0.168942440653073,1.02496607435179,0,0,0,0,0,0,0.655219697692825,0.737318726261158,0,0.19998739585493,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5018336599544,0,0.690359926060101,0,0,0,0,0,0.163771917510097,0.739280431085226,0,0,0,0,0,0,0,0,1.40538670403555,0,0,0,0,0,0.115233987555779,0,0,0,0.354581522651905,0.111231401892069,0,0,0.280272163313789,0,0.215927591218621,0,0.0714765441766563,0,0.23248285073625,0,0,0,0,0,0,0.118332000730565,0,0,0.9164274741762,0,0,0.223710863595585,0,0.243835849964539,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892769693028288,5.64631794745107,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0.506794004045748,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.224263725161227,0,0,0,0,0,0,0,0.651226148887796,0,0,0.449126010532934,0,0,0,0,0,0 | ||
|short_description=p@chr13:43451842..43451845,+ | |short_description=p@chr13:43451842..43451845,+ | ||
}} | }} |
Latest revision as of 16:07, 24 July 2015
Short description: | p@chr13:43451842..43451845, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:43451842..43451845, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
buccal mucosa cell | 1.22e-17 | 1 |
endothelial cell of viscerocranial mucosa | 1.22e-17 | 1 |
keratinized cell of the oral mucosa | 1.22e-17 | 1 |
endo-epithelial cell | 6.80e-10 | 42 |
keratocyte | 1.86e-09 | 2 |
migratory cranial neural crest cell | 1.86e-09 | 2 |
epithelial cell of alimentary canal | 5.29e-08 | 20 |
endodermal cell | 3.67e-07 | 58 |
pneumocyte | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.12e-09 | 2 |
alveolar duct | 1.12e-09 | 2 |
bronchiole | 1.12e-09 | 2 |
head connective tissue | 1.86e-09 | 2 |
substantia propria of cornea | 1.86e-09 | 2 |
pharynx | 6.35e-07 | 11 |
pulmonary alveolus epithelium | 7.28e-07 | 3 |
alveolus | 7.28e-07 | 3 |
pulmonary lobule | 7.28e-07 | 3 |
lobule | 7.28e-07 | 3 |
alveolus of lung | 7.28e-07 | 3 |
alveolar system | 7.28e-07 | 3 |
pulmonary acinus | 7.28e-07 | 3 |
alveolar sac | 7.28e-07 | 3 |
alveolar wall | 7.28e-07 | 3 |
tongue | 8.15e-07 | 3 |
gustatory system | 8.15e-07 | 3 |
future tongue | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
non-small cell lung carcinoma | 2.11e-14 | 5 |
squamous cell carcinoma | 2.45e-11 | 14 |
melanoma | 9.46e-10 | 2 |
lung adenocarcinoma | 1.12e-09 | 2 |
lung carcinoma | 2.05e-08 | 9 |
lung large cell carcinoma | 6.14e-07 | 3 |
cell type cancer | 7.67e-07 | 143 |