FFCP PHASE1:Hg19::chr13:52219478..52219509,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:52219478..52219509,- | |||
|coexpression_cluster_id=C408 | |coexpression_cluster_id=C408 | ||
|description=CAGE_peak_at_chr13:52219478..52219509,- | |description=CAGE_peak_at_chr13:52219478..52219509,- | ||
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|ontology_enrichment_development_v019=CL:0000790;6.33e-18;18 | |ontology_enrichment_development_v019=CL:0000790;6.33e-18;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.47e-22!80;UBERON:0001474!9.17e-20!86;UBERON:0002390!1.17e-18!102;UBERON:0003061!1.17e-18!102;UBERON:0002193!2.38e-16!112;UBERON:0004765!7.75e-16!101;UBERON:0001434!7.75e-16!101;UBERON:0002405!4.15e-13!115;UBERON:0002384!1.70e-11!375;UBERON:0002204!4.37e-07!167 | |ontology_enrichment_uberon=UBERON:0002371!9.47e-22!80;UBERON:0001474!9.17e-20!86;UBERON:0002390!1.17e-18!102;UBERON:0003061!1.17e-18!102;UBERON:0002193!2.38e-16!112;UBERON:0004765!7.75e-16!101;UBERON:0001434!7.75e-16!101;UBERON:0002405!4.15e-13!115;UBERON:0002384!1.70e-11!375;UBERON:0002204!4.37e-07!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr13:52219478..52219509,- | |short_description=p@chr13:52219478..52219509,- | ||
}} | }} |
Latest revision as of 16:45, 24 July 2015
Short description: | p@chr13:52219478..52219509, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:52219478..52219509, - |
Coexpression cluster: | C408_Basophils_CD14_amniotic_nasal_Natural_mature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 9.30e-28 | 3 |
mature alpha-beta T cell | 7.55e-18 | 18 |
alpha-beta T cell | 7.55e-18 | 18 |
immature T cell | 7.55e-18 | 18 |
mature T cell | 7.55e-18 | 18 |
immature alpha-beta T cell | 7.55e-18 | 18 |
leukocyte | 4.83e-14 | 136 |
CD4-positive, alpha-beta T cell | 5.17e-14 | 6 |
T cell | 5.69e-13 | 25 |
pro-T cell | 5.69e-13 | 25 |
hematopoietic stem cell | 2.70e-11 | 168 |
granulocyte | 4.66e-11 | 8 |
hematopoietic cell | 1.07e-10 | 177 |
nongranular leukocyte | 1.47e-10 | 115 |
lymphoid lineage restricted progenitor cell | 1.27e-09 | 52 |
hematopoietic oligopotent progenitor cell | 1.66e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-09 | 161 |
lymphocyte | 1.93e-09 | 53 |
common lymphoid progenitor | 1.93e-09 | 53 |
blood cell | 2.72e-08 | 11 |
CD8-positive, alpha-beta T cell | 3.63e-08 | 11 |
natural killer cell | 5.54e-08 | 3 |
pro-NK cell | 5.54e-08 | 3 |
single nucleate cell | 7.76e-08 | 3 |
mononuclear cell | 7.76e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 9.03e-08 | 120 |