FFCP PHASE1:Hg19::chr13:84570316..84570332,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:84570316..84570332,+ | |||
|description=CAGE_peak_at_chr13:84570316..84570332,+ | |description=CAGE_peak_at_chr13:84570316..84570332,+ | ||
|id=chr13:84570316..84570332,+ | |id=chr13:84570316..84570332,+ | ||
|ontology_enrichment_celltype=CL:0000039!7.16e-13!7;CL:0000586!7.16e-13!7;CL:0000159!6.17e-12!2;CL:0000319!3.73e-07!1;CL:0000181!5.16e-07!12;CL:0000417!5.16e-07!12;CL:0000668!5.16e-07!12;CL:0000414!5.16e-07!12;CL:0000412!5.16e-07!12;CL:0000182!5.16e-07!12 | |ontology_enrichment_celltype=CL:0000039!7.16e-13!7;CL:0000586!7.16e-13!7;CL:0000159!6.17e-12!2;CL:0000319!3.73e-07!1;CL:0000181!5.16e-07!12;CL:0000417!5.16e-07!12;CL:0000668!5.16e-07!12;CL:0000414!5.16e-07!12;CL:0000412!5.16e-07!12;CL:0000182!5.16e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000319;3.45e-21;1!CL:0000054;1.82e-11;2!CL:0000137;1.82e-11;2!CL:0000092;1.82e-11;2!CL:0002253;2.47e-11;2!CL:0000159;2.73e-11;2!CL:1000415;4.30e-11;2!CL:0002178;8.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,3.45e-21,1;CL:0000054,1.82e-11,2;CL:0000137,1.82e-11,2;CL:0000092,1.82e-11,2;CL:0002253,2.47e-11,2;CL:0000159,2.73e-11,2;CL:1000415,4.52e-11,2;CL:0002178,7.76e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.69e-18!143;DOID:162!3.71e-16!235;DOID:14566!1.08e-15!239;DOID:305!1.29e-12!106;DOID:0050686!8.54e-08!137;DOID:299!2.26e-07!25;DOID:0060085!2.95e-07!1;DOID:3165!2.95e-07!1;DOID:0060121!2.95e-07!1;DOID:2438!2.95e-07!1;DOID:4418!2.95e-07!1;DOID:1799!3.32e-07!1;DOID:10165!3.32e-07!1;DOID:1798!3.32e-07!1;DOID:3030!3.73e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.53e-21;1!DOID:3165;1.53e-21;1!DOID:0060121;1.53e-21;1!DOID:2438;1.53e-21;1!DOID:4418;1.53e-21;1!DOID:1799;2.30e-21;1!DOID:10165;2.30e-21;1!DOID:1798;2.30e-21;1!DOID:3030;3.45e-21;1!DOID:200;1.82e-11;2!DOID:4305;1.82e-11;2!DOID:299;9.13e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.53e-21,1;DOID:3165,1.53e-21,1;DOID:0060121,1.53e-21,1;DOID:2438,1.53e-21,1;DOID:4418,1.53e-21,1;DOID:1799,2.30e-21,1;DOID:10165,2.30e-21,1;DOID:1798,2.30e-21,1;DOID:3030,3.45e-21,1;DOID:200,1.82e-11,2;DOID:4305,1.82e-11,2;DOID:0050687,1.65e-08,143;DOID:162,6.25e-08,235;DOID:299,9.03e-08,25;DOID:14566,9.40e-08,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;8.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,8.29e-08,3;UBERON:0006242,8.29e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.69169171316418,2.2439411102443,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,2.08729105996604,0,0,0.163232808159148,0,4.760550074326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,6.85209623233755,7.94858446811959,0,0,1.44285876452761,0,1.9980960958213,0,0,0.514784993585894,0,0,0,0.407712618220842,0.732219924186332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,3.44082072255207,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,5.50004058410987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.219881033490858,2.2644426535001,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0.752122617877125,0.303114792872958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.69169171316418,2.2439411102443,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,2.08729105996604,0,0,0.163232808159148,0,4.760550074326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,6.85209623233755,7.94858446811959,0,0,1.44285876452761,0,1.9980960958213,0,0,0.514784993585894,0,0,0,0.407712618220842,0.732219924186332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,3.44082072255207,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,5.50004058410987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.219881033490858,2.2644426535001,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0.752122617877125,0.303114792872958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:84570316..84570332,+ | |short_description=p@chr13:84570316..84570332,+ | ||
}} | }} |
Latest revision as of 17:23, 24 July 2015
Short description: | p@chr13:84570316..84570332, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:84570316..84570332, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 3.45e-21 | 1 |
bone matrix secreting cell | 1.82e-11 | 2 |
osteocyte | 1.82e-11 | 2 |
osteoclast | 1.82e-11 | 2 |
epithelial cell of large intestine | 2.47e-11 | 2 |
seromucus secreting cell | 2.73e-11 | 2 |
epithelial cell of gall bladder | 4.52e-11 | 2 |
epithelial cell of stomach | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 8.29e-08 | 3 |
gall bladder primordium | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.53e-21 | 1 |
skin benign neoplasm | 1.53e-21 | 1 |
integumentary system benign neoplasm | 1.53e-21 | 1 |
dermis tumor | 1.53e-21 | 1 |
cutaneous fibrous histiocytoma | 1.53e-21 | 1 |
islet cell tumor | 2.30e-21 | 1 |
endocrine pancreas cancer | 2.30e-21 | 1 |
pancreatic endocrine carcinoma | 2.30e-21 | 1 |
mucinous adenocarcinoma | 3.45e-21 | 1 |
giant cell tumor | 1.82e-11 | 2 |
bone giant cell tumor | 1.82e-11 | 2 |
cell type cancer | 1.65e-08 | 143 |
cancer | 6.25e-08 | 235 |
adenocarcinoma | 9.03e-08 | 25 |
disease of cellular proliferation | 9.40e-08 | 239 |