FFCP PHASE1:Hg19::chr13:86240773..86240788,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:86240773..86240788,+ | |||
|coexpression_cluster_id=C3387 | |coexpression_cluster_id=C3387 | ||
|description=CAGE_peak_at_chr13:86240773..86240788,+ | |description=CAGE_peak_at_chr13:86240773..86240788,+ | ||
|id=chr13:86240773..86240788,+ | |id=chr13:86240773..86240788,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.08e-45!5;CL:0000540!1.38e-14!6;CL:0000031!1.38e-14!6;CL:0000404!1.38e-14!6;CL:0002231!8.35e-13!3;CL:0000039!3.15e-12!7;CL:0000586!3.15e-12!7;CL:0000047!4.47e-11!8;CL:0000167!6.73e-11!1;CL:0000164!6.73e-11!1;CL:0000502!6.73e-11!1;CL:0000172!6.73e-11!1;CL:0000173!6.73e-11!1;CL:0002351!6.73e-11!1;CL:0000148!8.27e-09!10;CL:0000541!8.27e-09!10 | |ontology_enrichment_celltype=CL:0002322!2.08e-45!5;CL:0000540!1.38e-14!6;CL:0000031!1.38e-14!6;CL:0000404!1.38e-14!6;CL:0002231!8.35e-13!3;CL:0000039!3.15e-12!7;CL:0000586!3.15e-12!7;CL:0000047!4.47e-11!8;CL:0000167!6.73e-11!1;CL:0000164!6.73e-11!1;CL:0000502!6.73e-11!1;CL:0000172!6.73e-11!1;CL:0000173!6.73e-11!1;CL:0002351!6.73e-11!1;CL:0000148!8.27e-09!10;CL:0000541!8.27e-09!10 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.01e-52;5!CL:0000540;2.05e-25;6!CL:0000404;2.05e-25;6!CL:0000167;2.66e-18;1!CL:0000164;2.66e-18;1!CL:0000502;2.66e-18;1!CL:0000172;2.66e-18;1!CL:0000173;2.66e-18;1!CL:0002321;9.39e-18;15!CL:0000148;1.62e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.93e-52,5;CL:0000540,1.81e-25,6;CL:0000031,1.81e-25,6;CL:0000404,1.81e-25,6;CL:0000047,2.73e-19,8;CL:0000167,2.66e-18,1;CL:0000164,2.66e-18,1;CL:0000502,2.66e-18,1;CL:0000172,2.66e-18,1;CL:0000173,2.66e-18,1;CL:0002351,2.66e-18,1;CL:0000148,1.67e-07,10;CL:0000541,1.67e-07,10;CL:0000133,8.40e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;2.05e-25;6!CL:0002351;2.66e-18;1 | |||
|ontology_enrichment_disease=DOID:4430!6.73e-11!1;DOID:6193!8.14e-11!1;DOID:3095!7.32e-07!22;DOID:2994!7.32e-07!22 | |ontology_enrichment_disease=DOID:4430!6.73e-11!1;DOID:6193!8.14e-11!1;DOID:3095!7.32e-07!22;DOID:2994!7.32e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:4430;2.66e-18;1!DOID:6193;3.75e-18;1!DOID:3350;9.46e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.66e-18,1;DOID:6193,3.75e-18,1;DOID:3350,9.46e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!9.10e-11!8;UBERON:0003101!4.27e-10!22;UBERON:0000079!4.27e-10!22;UBERON:0003135!5.74e-08!11 | |ontology_enrichment_uberon=UBERON:0000473!9.10e-11!8;UBERON:0003101!4.27e-10!22;UBERON:0000079!4.27e-10!22;UBERON:0003135!5.74e-08!11 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,1.06023814657188,1.2781333715647,0.932949495138334,3.02785021050754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.08334352616598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94668495082519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92903778158023,5.91419577368105,6.23160507043778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,13.6392015944842,0,14.3762693731992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13773924212448,0.551369397209069,0.250707539292375,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,1.06023814657188,1.2781333715647,0.932949495138334,3.02785021050754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.08334352616598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94668495082519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92903778158023,5.91419577368105,6.23160507043778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,13.6392015944842,0,14.3762693731992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13773924212448,0.551369397209069,0.250707539292375,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:86240773..86240788,+ | |short_description=p@chr13:86240773..86240788,+ | ||
}} | }} |
Latest revision as of 17:23, 24 July 2015
Short description: | p@chr13:86240773..86240788, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:86240773..86240788, + |
Coexpression cluster: | C3387_epithelioid_somatostatinoma_smallcell_iPS_H9_gastrointestinal_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.93e-52 | 5 |
neuron | 1.81e-25 | 6 |
neuroblast | 1.81e-25 | 6 |
electrically signaling cell | 1.81e-25 | 6 |
neuronal stem cell | 2.73e-19 | 8 |
peptide hormone secreting cell | 2.66e-18 | 1 |
enteroendocrine cell | 2.66e-18 | 1 |
type D enteroendocrine cell | 2.66e-18 | 1 |
somatostatin secreting cell | 2.66e-18 | 1 |
pancreatic D cell | 2.66e-18 | 1 |
progenitor cell of endocrine pancreas | 2.66e-18 | 1 |
melanocyte | 1.67e-07 | 10 |
melanoblast | 1.67e-07 | 10 |
neurectodermal cell | 8.40e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.66e-18 | 1 |
epithelioid sarcoma | 3.75e-18 | 1 |
mesenchymal cell neoplasm | 9.46e-10 | 2 |