FFCP PHASE1:Hg19::chr14:52535456..52535466,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:52535456..52535466,- | |||
|description=CAGE_peak_at_chr14:52535456..52535466,- | |description=CAGE_peak_at_chr14:52535456..52535466,- | ||
|id=chr14:52535456..52535466,- | |id=chr14:52535456..52535466,- | ||
|ontology_enrichment_celltype=CL:0000055!1.32e-08!180;CL:0000183!2.00e-08!59;CL:0000187!5.75e-08!54;CL:0000680!5.99e-08!57;CL:0000056!5.99e-08!57;CL:0000355!5.99e-08!57 | |ontology_enrichment_celltype=CL:0000055!1.32e-08!180;CL:0000183!2.00e-08!59;CL:0000187!5.75e-08!54;CL:0000680!5.99e-08!57;CL:0000056!5.99e-08!57;CL:0000355!5.99e-08!57 | ||
|ontology_enrichment_celltype_v019=CL:0002591;8.01e-18;1!CL:0000632;5.97e-07;3!CL:0000746;5.97e-07;3!CL:0002504;8.38e-07;3!CL:1000279;8.38e-07;3!CL:0002144;8.38e-07;3!CL:0002577;8.38e-07;3!CL:0002590;8.38e-07;3!CL:1000280;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.22e-17,1;CL:0000632,5.80e-07,3;CL:0000746,6.14e-07,3;CL:0000513,6.14e-07,3;CL:0002577,6.50e-07,3;CL:0002590,6.88e-07,3;CL:0002144,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;8.01e-18;1!UBERON:0004140;8.01e-18;1!UBERON:0007297;1.38e-09;2!CL:0000513;5.97e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!8.23e-09!11;UBERON:0006876!8.23e-09!11;UBERON:0002385!3.10e-08!63;UBERON:0001015!3.10e-08!63;UBERON:0000383!3.10e-08!63;UBERON:0000119!3.19e-08!312;UBERON:0001134!6.22e-08!61;UBERON:0002036!6.22e-08!61;UBERON:0003082!6.22e-08!61;UBERON:0005284!7.84e-08!5;UBERON:0000483!1.00e-07!309;UBERON:0000481!1.78e-07!347;UBERON:0000490!2.67e-07!138;UBERON:0000468!7.09e-07!659;UBERON:0004290!7.99e-07!70 | |ontology_enrichment_uberon=UBERON:0002200!8.23e-09!11;UBERON:0006876!8.23e-09!11;UBERON:0002385!3.10e-08!63;UBERON:0001015!3.10e-08!63;UBERON:0000383!3.10e-08!63;UBERON:0000119!3.19e-08!312;UBERON:0001134!6.22e-08!61;UBERON:0002036!6.22e-08!61;UBERON:0003082!6.22e-08!61;UBERON:0005284!7.84e-08!5;UBERON:0000483!1.00e-07!309;UBERON:0000481!1.78e-07!347;UBERON:0000490!2.67e-07!138;UBERON:0000468!7.09e-07!659;UBERON:0004290!7.99e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0005795;8.01e-18;1!UBERON:0000998;8.01e-18;1!UBERON:0006868;8.01e-18;1!UBERON:0000078;1.38e-09;2!UBERON:0002012;1.38e-09;2!UBERON:0008886;1.38e-09;2!UBERON:0010523;8.38e-07;3!UBERON:0001915;8.38e-07;3!UBERON:0006947;8.38e-07;3!UBERON:0001982;8.38e-07;3!UBERON:0004054;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,5.26e-18,1;UBERON:0006868,5.26e-18,1;UBERON:0000078,1.71e-09,2;UBERON:0007497,1.71e-09,2;UBERON:0003643,1.71e-09,2;UBERON:0003504,1.71e-09,2;UBERON:0003469,1.71e-09,2;UBERON:0003496,1.71e-09,2;UBERON:0002012,1.71e-09,2;UBERON:0008886,1.71e-09,2;UBERON:0007303,1.71e-09,2;UBERON:0002061,1.71e-09,2;UBERON:0005432,1.71e-09,2;UBERON:0004363,1.71e-09,2;UBERON:0006947,7.28e-07,3;UBERON:0004054,7.28e-07,3;UBERON:0000948,8.09e-07,24;UBERON:0005498,8.09e-07,24;UBERON:0004140,8.09e-07,24;UBERON:0009881,8.09e-07,24;UBERON:0004141,8.09e-07,24;UBERON:0003084,8.09e-07,24;UBERON:0007005,8.09e-07,24;UBERON:0004139,8.09e-07,24;UBERON:0004291,8.09e-07,24;UBERON:0010523,8.62e-07,3;UBERON:0001915,8.62e-07,3;UBERON:0001982,8.62e-07,3;UBERON:0004145,9.64e-07,3 | |||
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| ||
|short_description=p@chr14:52535456..52535466,- | |short_description=p@chr14:52535456..52535466,- | ||
}} | }} |
Latest revision as of 21:05, 24 July 2015
Short description: | p@chr14:52535456..52535466, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:52535456..52535466, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.22e-17 | 1 |
hepatic stellate cell | 5.80e-07 | 3 |
cardiac muscle cell | 6.14e-07 | 3 |
cardiac muscle myoblast | 6.14e-07 | 3 |
placental epithelial cell | 6.50e-07 | 3 |
smooth muscle cell of the brain vasculature | 6.88e-07 | 3 |
capillary endothelial cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 5.26e-18 | 1 |
seminal fluid secreting gland | 5.26e-18 | 1 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.71e-09 | 2 |
developing epithelial placode | 1.71e-09 | 2 |
respiratory system arterial blood vessel | 1.71e-09 | 2 |
respiratory system blood vessel | 1.71e-09 | 2 |
respiratory system artery | 1.71e-09 | 2 |
head blood vessel | 1.71e-09 | 2 |
pulmonary artery | 1.71e-09 | 2 |
pulmonary vascular system | 1.71e-09 | 2 |
pharyngeal vasculature | 1.71e-09 | 2 |
truncus arteriosus | 1.71e-09 | 2 |
aortic sac | 1.71e-09 | 2 |
pharyngeal arch artery | 1.71e-09 | 2 |
male genital duct | 7.28e-07 | 3 |
internal male genitalia | 7.28e-07 | 3 |
heart | 8.09e-07 | 24 |
primitive heart tube | 8.09e-07 | 24 |
primary heart field | 8.09e-07 | 24 |
anterior lateral plate mesoderm | 8.09e-07 | 24 |
heart tube | 8.09e-07 | 24 |
heart primordium | 8.09e-07 | 24 |
cardiac mesoderm | 8.09e-07 | 24 |
cardiogenic plate | 8.09e-07 | 24 |
heart rudiment | 8.09e-07 | 24 |
microcirculatory vessel | 8.62e-07 | 3 |
endothelium of capillary | 8.62e-07 | 3 |
capillary | 8.62e-07 | 3 |
outflow tract | 9.64e-07 | 3 |