FFCP PHASE1:Hg19::chr14:65233282..65233289,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:65233282..65233289,-
|short_description=p@chr14:65233282..65233289,-
|description=CAGE_peak_at_chr14:65233282..65233289,-
|association_with_transcript=NA
...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:65233282..65233289,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_at_chr14:65233282..65233289,- | |||
|id=chr14:65233282..65233289,- | |||
|ontology_enrichment_celltype=CL:0000764!7.52e-07!2;CL:0000765!7.52e-07!2;CL:0000050!7.52e-07!2;CL:0000038!7.52e-07!2;CL:0000558!7.52e-07!2;CL:0000547!7.52e-07!2;CL:0000549!7.52e-07!2;CL:0000550!7.52e-07!2;CL:0000552!7.52e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.85e-45;2!CL:0000558;2.85e-45;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.55e-45,2;CL:0000765,2.55e-45,2;CL:0000050,2.55e-45,2;CL:0000038,2.55e-45,2;CL:0000558,2.55e-45,2;CL:0000547,2.55e-45,2;CL:0000549,2.55e-45,2;CL:0000550,2.55e-45,2;CL:0000552,2.55e-45,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.58e-30;3 | |||
|ontology_enrichment_disease=DOID:1036!5.02e-11!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.03e-30!115;UBERON:0000955!2.25e-23!69;UBERON:0006238!2.25e-23!69;UBERON:0001049!4.57e-22!57;UBERON:0005068!4.57e-22!57;UBERON:0006241!4.57e-22!57;UBERON:0007135!4.57e-22!57;UBERON:0002616!4.38e-21!59;UBERON:0005743!1.48e-18!86;UBERON:0001017!1.86e-18!82;UBERON:0002346!1.47e-17!90;UBERON:0003075!2.18e-17!86;UBERON:0007284!2.18e-17!86;UBERON:0000073!2.75e-17!94;UBERON:0001016!2.75e-17!94;UBERON:0002308!6.70e-17!9;UBERON:0000125!6.70e-17!9;UBERON:0002020!5.13e-16!34;UBERON:0003528!5.13e-16!34;UBERON:0000153!1.07e-15!129;UBERON:0007811!1.07e-15!129;UBERON:0002780!2.39e-14!41;UBERON:0001890!2.39e-14!41;UBERON:0006240!2.39e-14!41;UBERON:0003080!6.61e-14!42;UBERON:0000033!1.17e-13!123;UBERON:0004733!1.04e-12!12;UBERON:0002028!1.04e-12!12;UBERON:0007277!1.04e-12!12;UBERON:0009663!1.43e-12!7;UBERON:0002791!1.46e-12!33;UBERON:0001893!4.25e-12!34;UBERON:0004732!1.30e-11!13;UBERON:0001869!3.41e-11!32;UBERON:0002298!1.14e-10!8;UBERON:0003056!1.80e-10!61;UBERON:0002680!2.00e-10!9;UBERON:0001895!2.00e-10!9;UBERON:0010092!2.00e-10!9;UBERON:0003076!7.42e-10!15;UBERON:0003057!7.42e-10!15;UBERON:0002420!1.33e-09!9;UBERON:0007245!1.33e-09!9;UBERON:0010009!1.33e-09!9;UBERON:0010011!1.33e-09!9;UBERON:0000454!1.33e-09!9;UBERON:0000924!1.41e-08!173;UBERON:0006601!1.41e-08!173;UBERON:0000988!1.89e-08!3;UBERON:0006331!2.55e-08!3;UBERON:0004121!2.70e-08!169;UBERON:0002619!7.26e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.09e-16;6!UBERON:0000007;2.90e-12;2!UBERON:0002680;7.04e-11;9!UBERON:0001895;7.04e-11;9!UBERON:0004733;2.16e-08;12!UBERON:0002028;2.16e-08;12!UBERON:0004732;8.17e-08;13!UBERON:0003296;9.10e-07;4!UBERON:0010133;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.39e-16,6;UBERON:0006215,8.39e-16,6;UBERON:0000007,3.24e-12,2;UBERON:0002680,7.22e-11,9;UBERON:0001895,7.22e-11,9;UBERON:0010092,7.22e-11,9;UBERON:0004733,2.20e-08,12;UBERON:0002028,2.20e-08,12;UBERON:0007277,2.20e-08,12;UBERON:0004732,8.31e-08,13;UBERON:0003076,6.99e-07,15;UBERON:0003057,6.99e-07,15;UBERON:0003296,9.63e-07,4;UBERON:0010133,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704387472105808,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.01631605266991,2.61435451024901,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,1.11362469558097,1.23087398947712,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0.254253650292766,0,0,0,0,0,0.482385754501632,4.5774520895125,2.54332297841817,0.886642856860642,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0.392125068635479,0.839107934879214,0.189753732724185,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0.53746777989381,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0.246277562248017,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0.336283722218824,0,1.13831095675649,0.0887023701626388,0,0,0.475788130837822,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.410651227424988,1.1598144313382,0,0,0.198950775161368,0,0,0,0.301925687133347,0,0.218559560503957,0,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0.437062287854782,0,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704387472105808,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.01631605266991,2.61435451024901,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,1.11362469558097,1.23087398947712,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0.254253650292766,0,0,0,0,0,0.482385754501632,4.5774520895125,2.54332297841817,0.886642856860642,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0.392125068635479,0.839107934879214,0.189753732724185,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0.53746777989381,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0.246277562248017,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0.336283722218824,0,1.13831095675649,0.0887023701626388,0,0,0.475788130837822,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.410651227424988,1.1598144313382,0,0,0.198950775161368,0,0,0,0.301925687133347,0,0.218559560503957,0,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0.437062287854782,0,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:65233282..65233289,- | |||
}} | }} |
Latest revision as of 21:55, 24 July 2015
Short description: | p@chr14:65233282..65233289, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:65233282..65233289, - |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.55e-45 | 2 |
erythroblast | 2.55e-45 | 2 |
megakaryocyte-erythroid progenitor cell | 2.55e-45 | 2 |
erythroid progenitor cell | 2.55e-45 | 2 |
reticulocyte | 2.55e-45 | 2 |
proerythroblast | 2.55e-45 | 2 |
basophilic erythroblast | 2.55e-45 | 2 |
polychromatophilic erythroblast | 2.55e-45 | 2 |
orthochromatic erythroblast | 2.55e-45 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.39e-16 | 6 |
rhombic lip | 8.39e-16 | 6 |
pituitary gland | 3.24e-12 | 2 |
regional part of metencephalon | 7.22e-11 | 9 |
metencephalon | 7.22e-11 | 9 |
future metencephalon | 7.22e-11 | 9 |
segmental subdivision of hindbrain | 2.20e-08 | 12 |
hindbrain | 2.20e-08 | 12 |
presumptive hindbrain | 2.20e-08 | 12 |
segmental subdivision of nervous system | 8.31e-08 | 13 |
posterior neural tube | 6.99e-07 | 15 |
chordal neural plate | 6.99e-07 | 15 |
gland of diencephalon | 9.63e-07 | 4 |
neuroendocrine gland | 9.63e-07 | 4 |