FFCP PHASE1:Hg19::chr15:56364241..56364257,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:56364241..56364257,- | |||
|coexpression_cluster_id=C2339 | |||
|description=CAGE_peak_at_chr15:56364241..56364257,- | |||
|id=chr15:56364241..56364257,- | |||
|ontology_enrichment_celltype=CL:0002322!6.42e-19!5;CL:1000415!1.44e-08!2;CL:0000159!2.78e-08!2;CL:0002535!5.10e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.76e-52;5!CL:0002321;7.88e-18;15!CL:1000415;1.51e-09;2!CL:0000148;1.62e-07;10!CL:0002166;6.69e-07;3!CL:0002621;6.69e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.02e-52,5;CL:1000415,1.12e-09,2;CL:0000148,1.62e-07,10;CL:0000541,1.62e-07,10;CL:0002621,6.50e-07,3;CL:0002166,6.88e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!3.88e-12!25;DOID:4362!9.74e-12!5;DOID:120!3.94e-09!27;DOID:193!2.19e-08!29;DOID:4468!2.32e-08!2;DOID:5093!2.85e-08!4;DOID:1612!2.85e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.90e-18;1!DOID:3149;2.90e-18;1!DOID:3451;8.32e-10;2!DOID:4159;8.32e-10;2!DOID:0060122;8.32e-10;2!DOID:4468;1.51e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.16e-18,1;DOID:3149,3.16e-18,1;DOID:3451,8.69e-10,2;DOID:4159,8.69e-10,2;DOID:0060122,8.69e-10,2;DOID:4468,1.86e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000002!1.31e-14!6;UBERON:0001560!1.31e-14!6;UBERON:0003100!3.39e-11!41;UBERON:0005795!3.75e-11!22;UBERON:0003134!8.12e-11!37;UBERON:0000474!8.12e-11!37;UBERON:0000995!2.78e-09!21;UBERON:0003975!8.41e-09!22;UBERON:0006955!5.10e-08!2;UBERON:0004801!5.10e-08!2;UBERON:0003133!9.00e-08!48;UBERON:0004175!1.36e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.69e-07;3!UBERON:0002110;8.86e-07;3!UBERON:0001723;8.86e-07;3!UBERON:0001033;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.50e-07,3;UBERON:0002110,7.28e-07,3;UBERON:0006242,7.28e-07,3;UBERON:0001723,9.64e-07,3;UBERON:0001033,9.64e-07,3;UBERON:0010056,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51239109112286,0.272746120590835,0,1.82960559194393,1.06023814657188,1.39432731443422,0.414644220061482,1.51392510525377,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,2.01578553838631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.907604499126468,0,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.697118721393016,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,1.30586246527318,0,0.216388639742091,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0.0979923974143777,0.34823682632161,0,0,0,0,0,0,0,0,0,0,0,1.95551382734803,0.561111741760736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16340704173638,0,0,0,0,3.01891218839339,0.551639951094387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552032215008773,0,0.352675943690684,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0.546974809018219,0,0,0,0.766574565837572,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.894843454382338,0,0,0,0,0,0,0.701818390386317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0.756998549010474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36893320434112,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr15:56364241..56364257,- | |||
}} |
Latest revision as of 02:43, 25 July 2015
Short description: | p@chr15:56364241..56364257, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:56364241..56364257, - |
Coexpression cluster: | C2339_iPS_gall_H9_keratoacanthoma_HES3GFP_colon_kidney |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.02e-52 | 5 |
epithelial cell of gall bladder | 1.12e-09 | 2 |
melanocyte | 1.62e-07 | 10 |
melanoblast | 1.62e-07 | 10 |
gingival epithelial cell | 6.50e-07 | 3 |
epithelial cell of Malassez | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.50e-07 | 3 |
gallbladder | 7.28e-07 | 3 |
gall bladder primordium | 7.28e-07 | 3 |
tongue | 9.64e-07 | 3 |
gustatory system | 9.64e-07 | 3 |
future tongue | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.16e-18 | 1 |
keratoacanthoma | 3.16e-18 | 1 |
skin carcinoma | 8.69e-10 | 2 |
skin cancer | 8.69e-10 | 2 |
integumentary system cancer | 8.69e-10 | 2 |
clear cell adenocarcinoma | 1.86e-09 | 2 |