FFCP PHASE1:Hg19::chr15:71624452..71624460,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:71624452..71624460,- | |||
|description=CAGE_peak_at_chr15:71624452..71624460,- | |description=CAGE_peak_at_chr15:71624452..71624460,- | ||
|id=chr15:71624452..71624460,- | |id=chr15:71624452..71624460,- | ||
|ontology_enrichment_celltype=CL:1000413!3.06e-08!9;CL:0000071!2.73e-07!18;CL:0002546!2.73e-07!18 | |ontology_enrichment_celltype=CL:1000413!3.06e-08!9;CL:0000071!2.73e-07!18;CL:0002546!2.73e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002588;9.07e-18;2!CL:0002592;2.59e-12;3!CL:0000306;1.12e-09;4!CL:0002222;1.12e-09;4!CL:0002224;1.12e-09;4!CL:0002569;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002588,6.48e-18,2;CL:0002592,2.31e-12,3;CL:0000306,1.12e-09,4;CL:0002222,1.12e-09,4;CL:0002224,1.12e-09,4;CL:0002569,8.48e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.14e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4235;5.05e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,7.06e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.14e-08!69;UBERON:0003915!3.06e-08!9;UBERON:0004700!3.06e-08!9;UBERON:0001917!3.06e-08!9;UBERON:0002049!3.84e-08!79;UBERON:0007798!3.84e-08!79;UBERON:0001981!5.57e-08!60;UBERON:0007500!5.57e-08!60;UBERON:0004537!5.57e-08!60;UBERON:0006965!5.57e-08!60;UBERON:0000487!1.76e-07!22;UBERON:0004872!2.61e-07!84;UBERON:0001986!2.73e-07!18;UBERON:0004638!2.73e-07!18;UBERON:0004852!2.73e-07!18;UBERON:0004535!6.11e-07!110;UBERON:0003914!7.22e-07!118 | |ontology_enrichment_uberon=UBERON:0000055!1.14e-08!69;UBERON:0003915!3.06e-08!9;UBERON:0004700!3.06e-08!9;UBERON:0001917!3.06e-08!9;UBERON:0002049!3.84e-08!79;UBERON:0007798!3.84e-08!79;UBERON:0001981!5.57e-08!60;UBERON:0007500!5.57e-08!60;UBERON:0004537!5.57e-08!60;UBERON:0006965!5.57e-08!60;UBERON:0000487!1.76e-07!22;UBERON:0004872!2.61e-07!84;UBERON:0001986!2.73e-07!18;UBERON:0004638!2.73e-07!18;UBERON:0004852!2.73e-07!18;UBERON:0004535!6.11e-07!110;UBERON:0003914!7.22e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0003498;2.59e-12;3!UBERON:0005985;2.59e-12;3!UBERON:0001621;2.59e-12;3!UBERON:0010077;1.12e-09;4!UBERON:0005389;1.12e-09;4!UBERON:0000484;1.12e-09;4!UBERON:0000965;1.12e-09;4!UBERON:0001803;1.12e-09;4!UBERON:0002066;6.55e-08;5!UBERON:0003422;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,2.31e-12,3;UBERON:0010077,1.12e-09,4;UBERON:0005389,1.12e-09,4;UBERON:0000484,1.12e-09,4;UBERON:0002546,1.12e-09,4;UBERON:0000965,1.12e-09,4;UBERON:0001803,1.12e-09,4;UBERON:0003073,1.12e-09,4;UBERON:0005426,1.12e-09,4;UBERON:0002066,5.73e-08,5;UBERON:0003498,6.13e-08,5;UBERON:0005985,6.13e-08,5;UBERON:0003422,8.48e-07,6 | |||
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| ||
|short_description=p@chr15:71624452..71624460,- | |short_description=p@chr15:71624452..71624460,- | ||
}} | }} |
Latest revision as of 03:55, 25 July 2015
Short description: | p@chr15:71624452..71624460, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:71624452..71624460, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical vein | 6.48e-18 | 2 |
smooth muscle cell of the coronary artery | 2.31e-12 | 3 |
crystallin accumulating cell | 1.12e-09 | 4 |
vertebrate lens cell | 1.12e-09 | 4 |
lens epithelial cell | 1.12e-09 | 4 |
mesenchymal stem cell of umbilical cord | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 2.31e-12 | 3 |
cuboidal epithelium | 1.12e-09 | 4 |
transparent eye structure | 1.12e-09 | 4 |
simple cuboidal epithelium | 1.12e-09 | 4 |
cranial placode | 1.12e-09 | 4 |
lens of camera-type eye | 1.12e-09 | 4 |
epithelium of lens | 1.12e-09 | 4 |
lens placode | 1.12e-09 | 4 |
lens vesicle | 1.12e-09 | 4 |
umbilical vein | 5.73e-08 | 5 |
heart blood vessel | 6.13e-08 | 5 |
coronary vessel | 6.13e-08 | 5 |
mesenchyme of umbilical cord | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 7.06e-34 | 1 |