FFCP PHASE1:Hg19::chr15:75299835..75299854,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:75299835..75299854,+ to FFCP PHASE1:Hg19::chr15:75299835..75299854,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:75299835..75299854,+ | |||
|coexpression_cluster_id=C132 | |||
|description=CAGE_peak_at_chr15:75299835..75299854,+ | |||
|id=chr15:75299835..75299854,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.45e-14!172;CL:0000566!6.45e-14!172;CL:0002032!6.90e-14!165;CL:0000837!6.90e-14!165;CL:0000945!7.46e-13!24;CL:0000826!7.46e-13!24;CL:0000988!1.22e-12!182;CL:0002087!5.76e-11!119;CL:0002619!2.90e-10!3;CL:0000738!3.86e-09!140;CL:0000763!6.59e-09!112;CL:0000049!6.59e-09!112;CL:0002031!2.21e-08!124;CL:0000236!5.08e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002619;7.74e-25;3!CL:0000945;2.52e-11;24!CL:0000785;4.68e-09;1!CL:0000819;4.68e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,6.86e-25,3;CL:0002032,2.38e-18,161;CL:0000837,2.38e-18,161;CL:0000037,1.93e-17,168;CL:0000988,2.23e-16,177;CL:0002087,8.09e-13,115;CL:0000763,4.53e-12,108;CL:0000049,4.53e-12,108;CL:0000945,2.52e-11,24;CL:0000826,2.52e-11,24;CL:0000738,1.94e-10,136;CL:0002031,1.98e-10,120;CL:0000819,4.87e-09,1;CL:0002194,1.33e-07,59;CL:0000576,1.33e-07,59;CL:0000040,1.33e-07,59;CL:0000559,1.33e-07,59;CL:0002009,2.54e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.76e-09;1!CL:0000049;3.66e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!1.05e-11!31;DOID:2531!1.42e-11!51;DOID:0060083!1.42e-11!51;DOID:1240!2.01e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.85e-19;31!DOID:1240;6.35e-17;39!DOID:2531;1.91e-15;51!DOID:0060083;1.91e-15;51!DOID:12603;1.26e-09;1!DOID:225;2.76e-09;1!DOID:0060073;4.68e-09;1!DOID:8675;4.68e-09;1!DOID:0060058;9.71e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.14e-24,51;DOID:0060083,1.14e-24,51;DOID:8692,4.20e-20,31;DOID:1240,1.93e-19,39;DOID:12603,1.21e-09,1;DOID:225,3.00e-09,1;DOID:0060073,4.87e-09,1;DOID:8675,4.87e-09,1;DOID:0060058,9.82e-08,10;DOID:0050686,1.16e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.49e-10!7;UBERON:0002106!1.24e-09!3;UBERON:0004854!1.24e-09!3;UBERON:0009034!1.24e-09!3;UBERON:0002095!1.24e-09!3;UBERON:0004782!1.24e-09!3;UBERON:0003281!1.24e-09!3;UBERON:0009664!1.24e-09!3;UBERON:0002296!1.24e-09!3;UBERON:0005602!1.24e-09!3;UBERON:0001179!1.24e-09!3;UBERON:0006293!1.24e-09!3;UBERON:0002193!6.97e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06316195519468,1.64201178899891,2.67616656466509,0,0,0.154816123316076,0,0,0,3.40855682553327,0,0,0.553995408531877,0,0,2.91090116511902,3.2389366601898,4.12120908214698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0.633765858935825,0,0.628975936525128,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.853460445133014,1.20118796110804,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01668572839441,0,0,0,0,0.383010740264733,0,3.57084134302011,2.80797178113459,19.6281823968545,0,5.01268954180134,0,0.1605880751037,0.80719882876419,0,0,18.7416866228159,23.4859913287037,18.8539530134457,9.57401667469997,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,1.27718352450966,0,0,0,0,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3472180532711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,2.04015451374069,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0.845855261818682,0.45120521581504,3.39799930144758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0.80822463617505,0.215166616178029,0,0,0,0,0,0,0,0,0,0.402547587182052,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06316195519468,1.64201178899891,2.67616656466509,0,0,0.154816123316076,0,0,0,3.40855682553327,0,0,0.553995408531877,0,0,2.91090116511902,3.2389366601898,4.12120908214698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0.633765858935825,0,0.628975936525128,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.853460445133014,1.20118796110804,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01668572839441,0,0,0,0,0.383010740264733,0,3.57084134302011,2.80797178113459,19.6281823968545,0,5.01268954180134,0,0.1605880751037,0.80719882876419,0,0,18.7416866228159,23.4859913287037,18.8539530134457,9.57401667469997,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,1.27718352450966,0,0,0,0,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3472180532711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,2.04015451374069,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0.845855261818682,0.45120521581504,3.39799930144758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0.80822463617505,0.215166616178029,0,0,0,0,0,0,0,0,0,0.402547587182052,0.641136984606466 | ||
|short_description=p@chr15:75299835..75299854,+ | |||
}} | }} |
Latest revision as of 04:16, 25 July 2015
Short description: | p@chr15:75299835..75299854, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:75299835..75299854, + |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 6.86e-25 | 3 |
hematopoietic oligopotent progenitor cell | 2.38e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.38e-18 | 161 |
hematopoietic stem cell | 1.93e-17 | 168 |
hematopoietic cell | 2.23e-16 | 177 |
nongranular leukocyte | 8.09e-13 | 115 |
myeloid cell | 4.53e-12 | 108 |
common myeloid progenitor | 4.53e-12 | 108 |
lymphocyte of B lineage | 2.52e-11 | 24 |
pro-B cell | 2.52e-11 | 24 |
leukocyte | 1.94e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 1.98e-10 | 120 |
B-1 B cell | 4.87e-09 | 1 |
monopoietic cell | 1.33e-07 | 59 |
monocyte | 1.33e-07 | 59 |
monoblast | 1.33e-07 | 59 |
promonocyte | 1.33e-07 | 59 |
macrophage dendritic cell progenitor | 2.54e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.14e-24 | 51 |
immune system cancer | 1.14e-24 | 51 |
myeloid leukemia | 4.20e-20 | 31 |
leukemia | 1.93e-19 | 39 |
acute leukemia | 1.21e-09 | 1 |
syndrome | 3.00e-09 | 1 |
lymphatic system cancer | 4.87e-09 | 1 |
lymphosarcoma | 4.87e-09 | 1 |
lymphoma | 9.82e-08 | 10 |
organ system cancer | 1.16e-07 | 137 |