FFCP PHASE1:Hg19::chr15:89417758..89417770,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:89417758..89417770,+ | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_at_chr15:89417758..89417770,+ | |description=CAGE_peak_at_chr15:89417758..89417770,+ | ||
|id=chr15:89417758..89417770,+ | |id=chr15:89417758..89417770,+ | ||
|ontology_enrichment_celltype=CL:0000153!2.17e-29!9;CL:0000447!2.17e-29!9;CL:0000667!5.36e-23!6;CL:0000058!5.36e-23!6;CL:0000138!5.36e-23!6;CL:0002620!1.29e-20!23;CL:0000327!1.48e-18!14;CL:0000057!3.48e-16!75;CL:0000499!7.50e-12!27;CL:0000055!3.15e-11!180;CL:0000214!2.16e-08!3;CL:0002580!4.87e-08!3;CL:0000151!7.82e-07!35 | |ontology_enrichment_celltype=CL:0000153!2.17e-29!9;CL:0000447!2.17e-29!9;CL:0000667!5.36e-23!6;CL:0000058!5.36e-23!6;CL:0000138!5.36e-23!6;CL:0002620!1.29e-20!23;CL:0000327!1.48e-18!14;CL:0000057!3.48e-16!75;CL:0000499!7.50e-12!27;CL:0000055!3.15e-11!180;CL:0000214!2.16e-08!3;CL:0002580!4.87e-08!3;CL:0000151!7.82e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.71e-77;9!CL:0000447;2.71e-77;9!CL:0000138;1.63e-59;6!CL:0000327;2.68e-46;15!CL:0000499;5.82e-32;28!CL:0000214;3.01e-20;3!CL:0000151;2.13e-15;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.71e-77,9;CL:0000447,2.71e-77,9;CL:0000058,1.63e-59,6;CL:0000138,1.63e-59,6;CL:0000327,2.68e-46,15;CL:0000499,5.70e-32,28;CL:0000214,3.01e-20,3;CL:0000151,4.34e-19,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4235!9.67e-07!1 | |ontology_enrichment_disease=DOID:4235!9.67e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4235;2.95e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,2.38e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.95e-13!40;UBERON:0002199!1.04e-11!45;UBERON:0002416!1.04e-11!45;UBERON:0006915!2.16e-08!3;UBERON:0002018!2.16e-08!3;UBERON:0002217!2.16e-08!3;UBERON:0007616!2.16e-08!3;UBERON:0003102!1.14e-07!95 | |ontology_enrichment_uberon=UBERON:0002097!1.95e-13!40;UBERON:0002199!1.04e-11!45;UBERON:0002416!1.04e-11!45;UBERON:0006915!2.16e-08!3;UBERON:0002018!2.16e-08!3;UBERON:0002217!2.16e-08!3;UBERON:0007616!2.16e-08!3;UBERON:0003102!1.14e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;3.01e-20;3!UBERON:0007616;3.01e-20;3!UBERON:0002217;3.01e-20;3!UBERON:0002018;3.01e-20;3!UBERON:0004905;3.51e-08;8!UBERON:0000982;3.51e-08;8!UBERON:0004770;3.51e-08;8!UBERON:0004457;2.29e-07;9!UBERON:0000042;2.29e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,3.01e-20,3;UBERON:0007616,3.01e-20,3;UBERON:0002217,3.01e-20,3;UBERON:0002018,3.01e-20,3;UBERON:0004905,3.51e-08,8;UBERON:0000982,3.51e-08,8;UBERON:0004770,3.51e-08,8 | |||
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|short_description=p@chr15:89417758..89417770,+ | |short_description=p@chr15:89417758..89417770,+ | ||
}} | }} |
Latest revision as of 05:15, 25 July 2015
Short description: | p@chr15:89417758..89417770, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:89417758..89417770, + |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.71e-77 | 9 |
carbohydrate secreting cell | 2.71e-77 | 9 |
chondroblast | 1.63e-59 | 6 |
chondrocyte | 1.63e-59 | 6 |
extracellular matrix secreting cell | 2.68e-46 | 15 |
stromal cell | 5.70e-32 | 28 |
synovial cell | 3.01e-20 | 3 |
secretory cell | 4.34e-19 | 36 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 3.01e-20 | 3 |
layer of synovial tissue | 3.01e-20 | 3 |
synovial joint | 3.01e-20 | 3 |
synovial membrane of synovial joint | 3.01e-20 | 3 |
articulation | 3.51e-08 | 8 |
skeletal joint | 3.51e-08 | 8 |
articular system | 3.51e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 2.38e-15 | 1 |