FFCP PHASE1:Hg19::chr16:449604..449620,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:449604..449620,+ | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_at_chr16:449604..449620,+ | |description=CAGE_peak_at_chr16:449604..449620,+ | ||
|id=chr16:449604..449620,+ | |id=chr16:449604..449620,+ | ||
|ontology_enrichment_celltype=CL:0000764!9.43e-07!2;CL:0000765!9.43e-07!2;CL:0000050!9.43e-07!2;CL:0000038!9.43e-07!2;CL:0000558!9.43e-07!2;CL:0000547!9.43e-07!2;CL:0000549!9.43e-07!2;CL:0000550!9.43e-07!2;CL:0000552!9.43e-07!2 | |ontology_enrichment_celltype=CL:0000764!9.43e-07!2;CL:0000765!9.43e-07!2;CL:0000050!9.43e-07!2;CL:0000038!9.43e-07!2;CL:0000558!9.43e-07!2;CL:0000547!9.43e-07!2;CL:0000549!9.43e-07!2;CL:0000550!9.43e-07!2;CL:0000552!9.43e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.81e-17;2!CL:0000558;2.81e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.81e-17,2;CL:0000765,2.81e-17,2;CL:0000050,2.81e-17,2;CL:0000038,2.81e-17,2;CL:0000558,2.81e-17,2;CL:0000547,2.81e-17,2;CL:0000549,2.81e-17,2;CL:0000550,2.81e-17,2;CL:0000552,2.81e-17,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!4.62e-08!8 | |ontology_enrichment_disease=DOID:1036!4.62e-08!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;2.62e-15;8!DOID:8692;1.20e-10;31!DOID:8552;4.19e-09;1!DOID:1240;2.38e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.34e-15,8;DOID:8692,3.72e-11,31;DOID:8552,4.19e-09,1;DOID:1240,1.04e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.97e-23!15;UBERON:0000179!4.97e-23!15;UBERON:0000463!4.97e-23!15;UBERON:0007023!4.01e-13!115 | |ontology_enrichment_uberon=UBERON:0000178!4.97e-23!15;UBERON:0000179!4.97e-23!15;UBERON:0000463!4.97e-23!15;UBERON:0007023!4.01e-13!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.31e-41;15!UBERON:0000179;2.31e-41;15!UBERON:0000463;2.31e-41;15!UBERON:0002390;2.01e-21;32!UBERON:0002193;9.12e-11;42!UBERON:0000996;9.17e-09;1!UBERON:0002134;9.17e-09;1!UBERON:0005208;9.17e-09;1!UBERON:0004145;9.17e-09;1!UBERON:0005946;9.17e-09;1!UBERON:0005965;9.17e-09;1!UBERON:0002078;9.17e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.31e-41,15;UBERON:0000179,2.31e-41,15;UBERON:0000463,2.31e-41,15;UBERON:0007023,7.02e-11,114;UBERON:0002134,9.17e-09,1;UBERON:0005208,9.17e-09,1;UBERON:0005946,9.17e-09,1;UBERON:0005965,9.17e-09,1;UBERON:0002078,9.17e-09,1;UBERON:0000996,9.91e-09,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37475437370216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,147.561896982714,142.743756259596,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,54.8043417970743,55.053878914251,32.4698896689273,12.6262840992628,18.9226645619649,34.369085493214,56.703300910002,39.6562588147135,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,1.6227340708559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,31.1328020051022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47679577690798,1.80476528493745,3.13700054908383,3.02078856556517,0,4.29128763247022,0,0,0,0,0,0,0.611030144933625,0,0,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,1.43574604915363,0,0,0.223171457441873,0.739018197353989,0,0,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0,0,0.449947783103001,0,0.0607495566580247,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,15.9008266694666,0,0,0,0,0.854299300541557,5.18774206828898,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.443511850813194,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.285906176706625,0,1.04617282831313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,5.02771526193902,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.49263787330687,0.23806443146374,0,0.124149428591716,0,0.0636471582781649,0.202117188958219,0,0,0,0.358611026963382,0,0,0.106727345877715,0,0,0,0,0.406896178315738,1.33151354837103,0.402547587182052,0 | ||
|short_description=p@chr16:449604..449620,+ | |short_description=p@chr16:449604..449620,+ | ||
}} | }} |
Latest revision as of 08:56, 25 July 2015
Short description: | p@chr16:449604..449620, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:449604..449620, + |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.81e-17 | 2 |
erythroblast | 2.81e-17 | 2 |
megakaryocyte-erythroid progenitor cell | 2.81e-17 | 2 |
erythroid progenitor cell | 2.81e-17 | 2 |
reticulocyte | 2.81e-17 | 2 |
proerythroblast | 2.81e-17 | 2 |
basophilic erythroblast | 2.81e-17 | 2 |
polychromatophilic erythroblast | 2.81e-17 | 2 |
orthochromatic erythroblast | 2.81e-17 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.31e-41 | 15 |
haemolymphatic fluid | 2.31e-41 | 15 |
organism substance | 2.31e-41 | 15 |
adult organism | 7.02e-11 | 114 |
tricuspid valve | 9.17e-09 | 1 |
right atrium valve | 9.17e-09 | 1 |
outflow tract of atrium | 9.17e-09 | 1 |
outflow part of right atrium | 9.17e-09 | 1 |
right cardiac atrium | 9.17e-09 | 1 |
vagina | 9.91e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.34e-15 | 8 |
myeloid leukemia | 3.72e-11 | 31 |
chronic myeloid leukemia | 4.19e-09 | 1 |
leukemia | 1.04e-08 | 39 |