FFCP PHASE1:Hg19::chr16:57681338..57681369,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:57681338..57681369,+ | |||
|description=CAGE_peak_at_chr16:57681338..57681369,+ | |description=CAGE_peak_at_chr16:57681338..57681369,+ | ||
|id=chr16:57681338..57681369,+ | |id=chr16:57681338..57681369,+ | ||
|ontology_enrichment_celltype=CL:0002139!9.96e-30!24;CL:0000115!5.51e-24!35;CL:0002078!1.59e-22!44;CL:0000071!3.88e-21!18;CL:0002546!3.88e-21!18;CL:0000213!1.39e-16!57;CL:0000215!1.39e-16!57;CL:1000413!1.49e-11!9;CL:0005020!3.05e-10!6;CL:0002138!3.05e-10!6;CL:0005022!3.05e-10!6;CL:0000076!1.44e-08!62;CL:0000222!8.17e-08!119;CL:0002543!3.25e-07!6;CL:0002544!3.29e-07!6;CL:0000625!4.14e-07!11;CL:0000623!8.70e-07!3;CL:0000825!8.70e-07!3 | |ontology_enrichment_celltype=CL:0002139!9.96e-30!24;CL:0000115!5.51e-24!35;CL:0002078!1.59e-22!44;CL:0000071!3.88e-21!18;CL:0002546!3.88e-21!18;CL:0000213!1.39e-16!57;CL:0000215!1.39e-16!57;CL:1000413!1.49e-11!9;CL:0005020!3.05e-10!6;CL:0002138!3.05e-10!6;CL:0005022!3.05e-10!6;CL:0000076!1.44e-08!62;CL:0000222!8.17e-08!119;CL:0002543!3.25e-07!6;CL:0002544!3.29e-07!6;CL:0000625!4.14e-07!11;CL:0000623!8.70e-07!3;CL:0000825!8.70e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.66e-29;24!CL:0000071;1.60e-18;18!CL:0000115;2.12e-17;36!CL:0000623;2.22e-15;3!CL:0002618;1.04e-13;3!CL:0002138;1.41e-12;6!CL:0002543;7.53e-12;6!CL:0002078;1.10e-11;45!CL:0000625;7.02e-10;11!CL:0000213;1.12e-09;58!CL:0000215;1.12e-09;58!CL:1000413;3.27e-08;9!CL:0000767;4.36e-07;3!CL:0002393;4.37e-07;6!CL:0002397;4.37e-07;6!CL:0000226;4.84e-07;3!CL:0000842;4.84e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.18e-29,24;CL:0000115,2.07e-21,36;CL:0000071,1.61e-18,18;CL:0002546,1.61e-18,18;CL:0002078,1.66e-16,45;CL:0000623,2.34e-15,3;CL:0000825,2.34e-15,3;CL:0000213,4.70e-14,58;CL:0000215,4.70e-14,58;CL:0002618,2.74e-13,3;CL:0005020,2.08e-12,6;CL:0002138,2.08e-12,6;CL:0005022,2.08e-12,6;CL:0002543,1.01e-11,6;CL:0000625,7.18e-10,11;CL:1000413,2.60e-08,9;CL:0000767,2.89e-07,3;CL:0000226,3.70e-07,3;CL:0000842,3.70e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.60e-18;18!CL:0005022;1.41e-12;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.88e-21!18;UBERON:0004638!3.88e-21!18;UBERON:0004852!3.88e-21!18;UBERON:0000487!2.21e-16!22;UBERON:0001009!4.73e-16!113;UBERON:0004535!6.26e-15!110;UBERON:0006914!7.83e-14!25;UBERON:0000055!2.22e-13!69;UBERON:0003915!1.49e-11!9;UBERON:0004700!1.49e-11!9;UBERON:0001917!1.49e-11!9;UBERON:0002049!1.35e-10!79;UBERON:0007798!1.35e-10!79;UBERON:0000178!2.85e-10!15;UBERON:0000179!2.85e-10!15;UBERON:0000463!2.85e-10!15;UBERON:0001981!2.16e-09!60;UBERON:0007500!2.16e-09!60;UBERON:0004537!2.16e-09!60;UBERON:0006965!2.16e-09!60;UBERON:0007023!4.28e-09!115;UBERON:0004872!4.38e-08!84;UBERON:0001473!2.02e-07!8;UBERON:0004536!2.02e-07!8;UBERON:0006558!2.02e-07!8;UBERON:0002465!2.47e-07!10;UBERON:0004111!2.94e-07!241;UBERON:0003081!4.68e-07!216;UBERON:0003914!4.86e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.60e-18;18!UBERON:0001986;1.60e-18;18!UBERON:0004852;1.60e-18;18!UBERON:0000178;1.32e-17;15!UBERON:0000179;1.32e-17;15!UBERON:0000463;1.32e-17;15!UBERON:0000487;7.24e-15;22!UBERON:0006914;6.81e-13;25!UBERON:0002193;1.21e-10;42!UBERON:0001473;1.89e-09;8!UBERON:0004536;1.89e-09;8!UBERON:0006558;1.89e-09;8!UBERON:0000490;1.23e-08;33!UBERON:0002066;2.03e-08;5!UBERON:0003915;3.27e-08;9!UBERON:0004700;3.27e-08;9!UBERON:0001917;3.27e-08;9!UBERON:0001264;6.04e-08;10!UBERON:0001638;6.23e-08;9!UBERON:0003920;6.23e-08;9!UBERON:0004582;6.23e-08;9!UBERON:0002465;1.44e-07;10!UBERON:0002390;1.93e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.61e-18,18;UBERON:0001986,1.61e-18,18;UBERON:0004852,1.61e-18,18;UBERON:0000178,5.96e-18,15;UBERON:0000179,5.96e-18,15;UBERON:0000463,5.96e-18,15;UBERON:0000487,7.28e-15,22;UBERON:0004535,3.58e-13,109;UBERON:0006914,6.84e-13,25;UBERON:0001009,1.08e-12,112;UBERON:0001473,2.52e-09,8;UBERON:0004536,2.52e-09,8;UBERON:0006558,2.52e-09,8;UBERON:0000055,2.29e-08,68;UBERON:0003915,2.60e-08,9;UBERON:0004700,2.60e-08,9;UBERON:0001917,2.60e-08,9;UBERON:0002066,3.60e-08,5;UBERON:0001264,5.80e-08,10;UBERON:0001638,7.53e-08,9;UBERON:0003920,7.53e-08,9;UBERON:0004582,7.53e-08,9;UBERON:0002465,1.81e-07,10;UBERON:0002049,5.79e-07,78;UBERON:0007798,5.79e-07,78 | |||
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| ||
|short_description=p@chr16:57681338..57681369,+ | |short_description=p@chr16:57681338..57681369,+ | ||
}} | }} |
Latest revision as of 10:39, 25 July 2015
Short description: | p@chr16:57681338..57681369, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:57681338..57681369, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.18e-29 | 24 |
endothelial cell | 2.07e-21 | 36 |
blood vessel endothelial cell | 1.61e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.61e-18 | 18 |
meso-epithelial cell | 1.66e-16 | 45 |
natural killer cell | 2.34e-15 | 3 |
pro-NK cell | 2.34e-15 | 3 |
lining cell | 4.70e-14 | 58 |
barrier cell | 4.70e-14 | 58 |
endothelial cell of umbilical vein | 2.74e-13 | 3 |
lymphangioblast | 2.08e-12 | 6 |
endothelial cell of lymphatic vessel | 2.08e-12 | 6 |
vascular lymphangioblast | 2.08e-12 | 6 |
vein endothelial cell | 1.01e-11 | 6 |
CD8-positive, alpha-beta T cell | 7.18e-10 | 11 |
endothelial cell of artery | 2.60e-08 | 9 |
basophil | 2.89e-07 | 3 |
single nucleate cell | 3.70e-07 | 3 |
mononuclear cell | 3.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.61e-18 | 18 |
endothelium | 1.61e-18 | 18 |
cardiovascular system endothelium | 1.61e-18 | 18 |
blood | 5.96e-18 | 15 |
haemolymphatic fluid | 5.96e-18 | 15 |
organism substance | 5.96e-18 | 15 |
simple squamous epithelium | 7.28e-15 | 22 |
cardiovascular system | 3.58e-13 | 109 |
squamous epithelium | 6.84e-13 | 25 |
circulatory system | 1.08e-12 | 112 |
lymphatic vessel | 2.52e-09 | 8 |
lymph vasculature | 2.52e-09 | 8 |
lymphatic part of lymphoid system | 2.52e-09 | 8 |
vessel | 2.29e-08 | 68 |
endothelial tube | 2.60e-08 | 9 |
arterial system endothelium | 2.60e-08 | 9 |
endothelium of artery | 2.60e-08 | 9 |
umbilical vein | 3.60e-08 | 5 |
pancreas | 5.80e-08 | 10 |
vein | 7.53e-08 | 9 |
venous blood vessel | 7.53e-08 | 9 |
venous system | 7.53e-08 | 9 |
lymphoid system | 1.81e-07 | 10 |
vasculature | 5.79e-07 | 78 |
vascular system | 5.79e-07 | 78 |