FFCP PHASE1:Hg19::chr16:86229916..86229943,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:86229916..86229943,+ | |||
|coexpression_cluster_id=C418 | |coexpression_cluster_id=C418 | ||
|description=CAGE_peak_at_chr16:86229916..86229943,+ | |description=CAGE_peak_at_chr16:86229916..86229943,+ | ||
|id=chr16:86229916..86229943,+ | |id=chr16:86229916..86229943,+ | ||
|ontology_enrichment_celltype=CL:0002504!3.57e-17!3;CL:1000279!3.57e-17!3;CL:1000280!3.57e-17!3;CL:0002622!1.85e-08!3 | |ontology_enrichment_celltype=CL:0002504!3.57e-17!3;CL:1000279!3.57e-17!3;CL:1000280!3.57e-17!3;CL:0002622!1.85e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002504;2.94e-37;3!CL:1000279;2.94e-37;3!CL:1000280;2.94e-37;3!CL:0002622;1.58e-17;3!CL:1000487;1.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,2.95e-37,3;CL:1000279,2.95e-37,3;CL:1000280,2.95e-37,3;CL:0002622,1.08e-17,3;CL:1000487,1.12e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;9.86e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,9.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000059!2.31e-23!11;UBERON:0000160!2.26e-21!27;UBERON:0001155!4.54e-21!9;UBERON:0005409!2.27e-19!35;UBERON:0001007!4.84e-16!155;UBERON:0001555!4.84e-16!155;UBERON:0007026!4.84e-16!155;UBERON:0004921!3.06e-15!129;UBERON:0004185!3.06e-15!129;UBERON:0004119!2.84e-14!169;UBERON:0000925!2.84e-14!169;UBERON:0006595!2.84e-14!169;UBERON:0001046!2.77e-13!19;UBERON:0003101!4.08e-11!22;UBERON:0000079!4.08e-11!22;UBERON:0000162!1.32e-09!14;UBERON:0001353!1.32e-09!14;UBERON:0000163!1.32e-09!14;UBERON:0006866!1.32e-09!14;UBERON:0000164!1.32e-09!14;UBERON:0000931!1.32e-09!14;UBERON:0004122!6.03e-09!15;UBERON:0001135!7.38e-09!15;UBERON:0002367!3.54e-08!11;UBERON:0010147!3.54e-08!11;UBERON:0009846!3.54e-08!11;UBERON:0003353!3.54e-08!11;UBERON:0004902!3.54e-08!11;UBERON:0003820!3.54e-08!11;UBERON:0009847!3.54e-08!11;UBERON:0003937!1.69e-07!12;UBERON:0005399!1.69e-07!12 | |ontology_enrichment_uberon=UBERON:0000059!2.31e-23!11;UBERON:0000160!2.26e-21!27;UBERON:0001155!4.54e-21!9;UBERON:0005409!2.27e-19!35;UBERON:0001007!4.84e-16!155;UBERON:0001555!4.84e-16!155;UBERON:0007026!4.84e-16!155;UBERON:0004921!3.06e-15!129;UBERON:0004185!3.06e-15!129;UBERON:0004119!2.84e-14!169;UBERON:0000925!2.84e-14!169;UBERON:0006595!2.84e-14!169;UBERON:0001046!2.77e-13!19;UBERON:0003101!4.08e-11!22;UBERON:0000079!4.08e-11!22;UBERON:0000162!1.32e-09!14;UBERON:0001353!1.32e-09!14;UBERON:0000163!1.32e-09!14;UBERON:0006866!1.32e-09!14;UBERON:0000164!1.32e-09!14;UBERON:0000931!1.32e-09!14;UBERON:0004122!6.03e-09!15;UBERON:0001135!7.38e-09!15;UBERON:0002367!3.54e-08!11;UBERON:0010147!3.54e-08!11;UBERON:0009846!3.54e-08!11;UBERON:0003353!3.54e-08!11;UBERON:0004902!3.54e-08!11;UBERON:0003820!3.54e-08!11;UBERON:0009847!3.54e-08!11;UBERON:0003937!1.69e-07!12;UBERON:0005399!1.69e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.14e-43;17!UBERON:0005409;1.19e-42;22!UBERON:0000059;5.70e-28;11!UBERON:0004921;2.49e-27;33!UBERON:0001155;4.66e-22;9!UBERON:0001135;2.28e-13;15!UBERON:0002108;5.85e-11;4!UBERON:0002367;7.59e-11;11!UBERON:0010147;7.59e-11;11!UBERON:0003937;5.47e-10;12!UBERON:0005399;5.47e-10;12!UBERON:0003101;2.53e-09;22!UBERON:0000079;2.53e-09;22!UBERON:0001555;2.59e-09;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.15e-43,17;UBERON:0005409,1.26e-37,25;UBERON:0000059,4.56e-28,11;UBERON:0001155,3.95e-22,9;UBERON:0004921,1.32e-13,118;UBERON:0001135,2.13e-13,15;UBERON:0002367,6.53e-11,11;UBERON:0010147,6.53e-11,11;UBERON:0009846,6.53e-11,11;UBERON:0003353,6.53e-11,11;UBERON:0004902,6.53e-11,11;UBERON:0003820,6.53e-11,11;UBERON:0009847,6.53e-11,11;UBERON:0001046,6.54e-11,19;UBERON:0002108,7.14e-11,4;UBERON:0001007,8.31e-11,145;UBERON:0001555,8.31e-11,145;UBERON:0007026,8.31e-11,145;UBERON:0003937,4.76e-10,12;UBERON:0005399,4.76e-10,12;UBERON:0004119,1.18e-09,160;UBERON:0000925,1.18e-09,160;UBERON:0006595,1.18e-09,160;UBERON:0003101,2.39e-09,22;UBERON:0000079,2.39e-09,22;UBERON:0000162,1.09e-08,14;UBERON:0001353,1.09e-08,14;UBERON:0000163,1.09e-08,14;UBERON:0006866,1.09e-08,14;UBERON:0000164,1.09e-08,14;UBERON:0000931,1.09e-08,14;UBERON:0004122,3.83e-08,15 | |||
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|short_description=p@chr16:86229916..86229943,+ | |short_description=p@chr16:86229916..86229943,+ | ||
}} | }} |
Latest revision as of 13:05, 25 July 2015
Short description: | p@chr16:86229916..86229943, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:86229916..86229943, + |
Coexpression cluster: | C418_normal_Melanocyte_Hep2_cervical_umbilical_osteosarcoma_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 2.95e-37 | 3 |
smooth muscle cell of large intestine | 2.95e-37 | 3 |
smooth muscle cell of colon | 2.95e-37 | 3 |
prostate stromal cell | 1.08e-17 | 3 |
smooth muscle cell of prostate | 1.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.15e-43 | 17 |
gastrointestinal system | 1.26e-37 | 25 |
large intestine | 4.56e-28 | 11 |
colon | 3.95e-22 | 9 |
subdivision of digestive tract | 1.32e-13 | 118 |
smooth muscle tissue | 2.13e-13 | 15 |
prostate gland | 6.53e-11 | 11 |
male accessory sex gland | 6.53e-11 | 11 |
embryonic cloacal epithelium | 6.53e-11 | 11 |
epithelium of hindgut | 6.53e-11 | 11 |
urogenital sinus epithelium | 6.53e-11 | 11 |
prostate bud | 6.53e-11 | 11 |
prostate field | 6.53e-11 | 11 |
hindgut | 6.54e-11 | 19 |
small intestine | 7.14e-11 | 4 |
digestive system | 8.31e-11 | 145 |
digestive tract | 8.31e-11 | 145 |
primitive gut | 8.31e-11 | 145 |
sex gland | 4.76e-10 | 12 |
male reproductive gland | 4.76e-10 | 12 |
endoderm-derived structure | 1.18e-09 | 160 |
endoderm | 1.18e-09 | 160 |
presumptive endoderm | 1.18e-09 | 160 |
male organism | 2.39e-09 | 22 |
male reproductive system | 2.39e-09 | 22 |
cloaca | 1.09e-08 | 14 |
anal region | 1.09e-08 | 14 |
embryonic cloaca | 1.09e-08 | 14 |
terminal part of digestive tract | 1.09e-08 | 14 |
primitive urogenital sinus | 1.09e-08 | 14 |
proctodeum | 1.09e-08 | 14 |
genitourinary system | 3.83e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
teratoma | 9.87e-08 | 2 |