FFCP PHASE1:Hg19::chr17:17287371..17287378,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_ENST00000392730,ENST00000396469_5end | |association_with_transcript=-45bp_to_ENST00000392730,ENST00000396469_5end | ||
|cluster_id=chr17:17287371..17287378,- | |||
|coexpression_cluster_id=C527 | |||
|description=CAGE_peak_1_at_ENST00000392730_5end,CAGE_peak_1_at_ENST00000396469_5end | |description=CAGE_peak_1_at_ENST00000392730_5end,CAGE_peak_1_at_ENST00000396469_5end | ||
|id=chr17:17287371..17287378,- | |id=chr17:17287371..17287378,- | ||
|ontology_enrichment_celltype=CL:0000838!1.36e-15!52;CL:0000542!1.46e-15!53;CL:0000051!1.46e-15!53;CL:0000791!2.35e-11!18;CL:0000789!2.35e-11!18;CL:0002420!2.35e-11!18;CL:0002419!2.35e-11!18;CL:0000790!2.35e-11!18;CL:0000084!4.70e-09!25;CL:0000827!4.70e-09!25;CL:0000625!4.13e-08!11;CL:0000236!8.17e-08!14;CL:0002087!3.40e-07!119;CL:0002371!5.57e-07!591;CL:0000945!7.79e-07!24;CL:0000826!7.79e-07!24 | |ontology_enrichment_celltype=CL:0000838!1.36e-15!52;CL:0000542!1.46e-15!53;CL:0000051!1.46e-15!53;CL:0000791!2.35e-11!18;CL:0000789!2.35e-11!18;CL:0002420!2.35e-11!18;CL:0002419!2.35e-11!18;CL:0000790!2.35e-11!18;CL:0000084!4.70e-09!25;CL:0000827!4.70e-09!25;CL:0000625!4.13e-08!11;CL:0000236!8.17e-08!14;CL:0002087!3.40e-07!119;CL:0002371!5.57e-07!591;CL:0000945!7.79e-07!24;CL:0000826!7.79e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.35e-11;18!CL:0000789;2.35e-11;18!CL:0002419;2.35e-11;18!CL:0000542;4.23e-10;53!CL:0000084;4.64e-09;25!CL:0000236;3.73e-08;13!CL:0000625;4.13e-08;11!CL:0000945;7.81e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.36e-15,52;CL:0000542,1.46e-15,53;CL:0000051,1.46e-15,53;CL:0000791,2.35e-11,18;CL:0000789,2.35e-11,18;CL:0002420,2.35e-11,18;CL:0002419,2.35e-11,18;CL:0000790,2.35e-11,18;CL:0000084,4.70e-09,25;CL:0000827,4.70e-09,25;CL:0002087,2.99e-08,115;CL:0000625,4.13e-08,11;CL:0000236,8.17e-08,14;CL:0002031,7.58e-07,120;CL:0000945,7.79e-07,24;CL:0000826,7.79e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;2.35e-11;18!CL:0000051;4.23e-10;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ENST00000392730,p1@ENST00000396469 | |short_description=p1@ENST00000392730,p1@ENST00000396469 | ||
}} | }} |
Latest revision as of 14:18, 25 July 2015
Short description: | p1@ENST00000392730, p1@ENST00000396469 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000392730_5end, CAGE_peak_1_at_ENST00000396469_5end |
Coexpression cluster: | C527_CD4_CD8_CD19_CD34_CD133_skeletal_Mesenchymal |
Association with transcript: | -45bp_to_ENST00000392730, ENST00000396469_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.36e-15 | 52 |
lymphocyte | 1.46e-15 | 53 |
common lymphoid progenitor | 1.46e-15 | 53 |
mature alpha-beta T cell | 2.35e-11 | 18 |
alpha-beta T cell | 2.35e-11 | 18 |
immature T cell | 2.35e-11 | 18 |
mature T cell | 2.35e-11 | 18 |
immature alpha-beta T cell | 2.35e-11 | 18 |
T cell | 4.70e-09 | 25 |
pro-T cell | 4.70e-09 | 25 |
nongranular leukocyte | 2.99e-08 | 115 |
CD8-positive, alpha-beta T cell | 4.13e-08 | 11 |
B cell | 8.17e-08 | 14 |
hematopoietic lineage restricted progenitor cell | 7.58e-07 | 120 |
lymphocyte of B lineage | 7.79e-07 | 24 |
pro-B cell | 7.79e-07 | 24 |