FFCP PHASE1:Hg19::chr17:46716676..46716698,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENST00000438772_5end | |association_with_transcript=-29bp_to_ENST00000438772_5end | ||
|cluster_id=chr17:46716676..46716698,- | |||
|coexpression_cluster_id=C3647 | |||
|description=CAGE_peak_1_at_ENST00000438772_5end | |description=CAGE_peak_1_at_ENST00000438772_5end | ||
|id=chr17:46716676..46716698,- | |id=chr17:46716676..46716698,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.67e-21;1 | |||
|ontology_enrichment_disease=DOID:6193!2.22e-09!1 | |ontology_enrichment_disease=DOID:6193!2.22e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:6193;3.12e-21;1!DOID:3350;2.60e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,3.45e-21,1;DOID:3350,2.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000059!9.89e-26!11;UBERON:0004907!6.00e-15!5;UBERON:0001155!1.68e-14!9;UBERON:0000160!4.78e-13!27;UBERON:0005409!6.67e-13!35;UBERON:0006947!1.94e-11!3;UBERON:0004054!1.94e-11!3;UBERON:0001154!2.60e-09!1;UBERON:0001153!2.60e-09!1;UBERON:0001000!3.05e-09!1;UBERON:0005352!3.05e-09!1;UBERON:0000998!3.58e-09!1;UBERON:0006868!3.58e-09!1;UBERON:0001052!6.23e-09!4;UBERON:0005904!8.51e-09!4;UBERON:0000997!9.17e-09!1;UBERON:0005056!9.17e-09!1;UBERON:0004175!1.64e-07!25;UBERON:0003133!5.64e-07!48 | |ontology_enrichment_uberon=UBERON:0000059!9.89e-26!11;UBERON:0004907!6.00e-15!5;UBERON:0001155!1.68e-14!9;UBERON:0000160!4.78e-13!27;UBERON:0005409!6.67e-13!35;UBERON:0006947!1.94e-11!3;UBERON:0004054!1.94e-11!3;UBERON:0001154!2.60e-09!1;UBERON:0001153!2.60e-09!1;UBERON:0001000!3.05e-09!1;UBERON:0005352!3.05e-09!1;UBERON:0000998!3.58e-09!1;UBERON:0006868!3.58e-09!1;UBERON:0001052!6.23e-09!4;UBERON:0005904!8.51e-09!4;UBERON:0000997!9.17e-09!1;UBERON:0005056!9.17e-09!1;UBERON:0004175!1.64e-07!25;UBERON:0003133!5.64e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0000059;2.19e-64;11!UBERON:0000160;1.93e-39;17!UBERON:0004907;5.25e-36;5!UBERON:0001155;1.25e-35;9!UBERON:0005409;6.67e-31;22!UBERON:0001154;4.67e-21;1!UBERON:0001153;4.67e-21;1!UBERON:0009854;4.67e-21;1!UBERON:0001000;7.72e-21;1!UBERON:0005352;7.72e-21;1!UBERON:0001052;1.10e-20;4!UBERON:0004921;1.27e-19;33!UBERON:0001007;1.25e-09;81!UBERON:0006947;7.76e-08;3!UBERON:0004054;7.76e-08;3!UBERON:0001555;1.59e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,1.86e-64,11;UBERON:0000160,1.75e-39,17;UBERON:0004907,4.66e-36,5;UBERON:0001155,1.25e-35,9;UBERON:0005409,2.22e-27,25;UBERON:0001154,5.16e-21,1;UBERON:0001153,5.16e-21,1;UBERON:0001045,5.16e-21,1;UBERON:0001000,7.72e-21,1;UBERON:0005352,7.72e-21,1;UBERON:0001052,9.46e-21,4;UBERON:0001046,5.03e-10,19;UBERON:0004921,6.45e-08,118;UBERON:0006947,7.76e-08,3;UBERON:0004054,7.76e-08,3 | |||
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|short_description=p1@ENST00000438772 | |short_description=p1@ENST00000438772 | ||
}} | }} |
Latest revision as of 18:13, 25 July 2015
Short description: | p1@ENST00000438772 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000438772_5end |
Coexpression cluster: | C3647_adult_colon_rectal_epithelioid_appendix_rectum_ductus |
Association with transcript: | -29bp_to_ENST00000438772_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
large intestine | 1.86e-64 | 11 |
intestine | 1.75e-39 | 17 |
lower digestive tract | 4.66e-36 | 5 |
colon | 1.25e-35 | 9 |
gastrointestinal system | 2.22e-27 | 25 |
vermiform appendix | 5.16e-21 | 1 |
caecum | 5.16e-21 | 1 |
midgut | 5.16e-21 | 1 |
vas deferens | 7.72e-21 | 1 |
spermatic cord | 7.72e-21 | 1 |
rectum | 9.46e-21 | 4 |
hindgut | 5.03e-10 | 19 |
subdivision of digestive tract | 6.45e-08 | 118 |
male genital duct | 7.76e-08 | 3 |
internal male genitalia | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.45e-21 | 1 |
mesenchymal cell neoplasm | 2.73e-11 | 2 |