FFCP PHASE1:Hg19::chr17:47133219..47133223,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:47133219..47133223,+ | |||
|coexpression_cluster_id=C2417 | |||
|description=CAGE_peak_at_chr17:47133219..47133223,+ | |description=CAGE_peak_at_chr17:47133219..47133223,+ | ||
|id=chr17:47133219..47133223,+ | |id=chr17:47133219..47133223,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.25e-09!180;CL:0002319!1.96e-08!25 | |ontology_enrichment_celltype=CL:0000055!3.25e-09!180;CL:0002319!1.96e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.52e-08;25!CL:0000039;2.89e-07;7!CL:0000586;2.89e-07;7!CL:0000243;5.26e-07;15!CL:0000125;5.26e-07;15!CL:0000095;6.40e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.50e-08,25;CL:0000039,3.48e-07,7;CL:0000586,3.48e-07,7;CL:0000243,5.07e-07,15;CL:0000125,5.07e-07,15;CL:0000030,5.07e-07,15;CL:0000339,5.07e-07,15;CL:0000095,6.51e-07,17;CL:0000123,6.51e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000339;5.26e-07;15 | |||
|ontology_enrichment_disease=DOID:0050687!4.30e-13!143;DOID:162!1.24e-12!235;DOID:14566!1.44e-12!239;DOID:3095!5.03e-11!22;DOID:2994!5.03e-11!22;DOID:305!6.98e-07!106 | |ontology_enrichment_disease=DOID:0050687!4.30e-13!143;DOID:162!1.24e-12!235;DOID:14566!1.44e-12!239;DOID:3095!5.03e-11!22;DOID:2994!5.03e-11!22;DOID:305!6.98e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.30e-14;22!DOID:2994;1.30e-14;22 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.66e-15,239;DOID:162,4.11e-15,235;DOID:3095,1.38e-14,22;DOID:2994,1.38e-14,22;DOID:0050687,2.83e-14,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.27e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.65e-08,10;UBERON:0000358,4.65e-08,10;UBERON:0000307,4.65e-08,10;UBERON:0000091,4.65e-08,10;UBERON:0000087,4.65e-08,10;UBERON:0007010,4.65e-08,10;UBERON:0007806,4.65e-08,10;UBERON:0008780,4.65e-08,10;UBERON:0005728,4.65e-08,10 | |||
|phase1_expression=0,0,0,2.00146596706261,0.893922188854576,0,0,0,0,3.68600904752263,4.18680700783456,3.49506195408276,4.74780560811216,0.247532705920093,0.994192127183747,2.01697543935533,0.602694528023977,5.11217063271161,2.92759679274304,2.58554221961255,2.04000691244253,4.70182082217132,1.43117993565528,1.77936752594749,1.50651167513763,0.687720651731561,0.410502947249729,0.472264687882075,0,0,0,0,0,0,0.852139206383318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,1.02290049474824,0.722878304769133,1.00267582127178,0,0,0,1.51255707462509,2.66075276955077,2.0202000709419,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47606237746061,0.626984899610432,1.29208379584664,1.06729878806013,1.00416183829401,0,0,0,0.367663080345869,0,2.67899184852239,1.34717623575702,0.788280363383256,0,0.949265659568129,2.74802615895611,0,0,0,5.96366342034382,0,0.132409180813219,0,0,2.24271040056923,1.06748995729705,2.96001058100592,0,1.61652806483626,0.817309515567294,0.908144565869588,0.576175924479999,1.40592859100278,0,0,0.597794722207204,0.704606991862589,1.61872944368132,0.842704840213491,0,1.84251475967652,0,0,0,0,0,1.5150250255866,0.625592599359821,0,0,0,0.150238058906597,1.24775401476023,1.25572744982203,0.85422955527427,1.05965950579781,1.20036438433761,0.92747276314595,0.515281080091258,0,1.68776332241266,0.584622030967192,1.26216887122057,0.828449087780694,0.484938170456436,0,1.0075209822764,2.03472710772585,0,0,0,7.68434348616451,7.81925633096763,8.8307396580834,9.95146128147556,15.1392510525377,18.2488679537915,0,0,0,0,0,1.77460200059766,3.37169380156203,1.92808823906786,2.53676137284506,1.96091499683166,1.89816495288877,0.943819157121151,1.56977172100277,1.92373578473195,2.21446636387394,4.20725321410337,0.8231480226628,2.94017422771084,0,0,0.590789906681404,0,6.76436411987125,1.88724591328378,0,0,0,1.94435734832912,1.62904152655162,0,1.44331342025273,1.507095264676,0.939269553886573,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,1.23344192779897,2.1798003441664,1.83345714552375,2.45616259939778,0,0,0.797814349754612,2.08014873822732,0,5.67396528093113,0.532844358032199,1.42977993658148,2.71310802695722,4.11620168390384,0,0.355391948742546,10.2953743481346,0,0,0,0,0,0,1.19812427745791,2.29723871668228,0,0.723906533337896,0.410952645100767,0,0,0,0,0,0.508189248444927,1.30139853857622,1.54657762555539,0.670065061337395,0.637938751653163,0,0,0,0.36807447515742,0.500170521059677,2.71265023699736,0,0,0.157702415033935,0.117141414992713,0.300946099727719,2.27407504055985,0,2.65690239414175,0,0.260650843404249,2.34961388955289,5.14715135716284,0,0,0,1.21251028578504,1.66435439510497,0,0,0.153461973288062,0,0.128139149255701,2.55853624533352,0.321707842287215,0,1.23367755042124,0,0.657017248110473,1.03850885836724,0.232420756919918,10.2730532152879,0,0,0.114814448164607,0.364182336013434,0.786746489756545,0.451199612907412,0.693138033939733,0.784349769176855,4.38417673959782,1.89992932007176,0,2.72149928442425,0.647747748306418,0,1.08378575017541,1.00337954770971,0.254876273045038,0,2.91037181138832,0,0,2.82095137628028,3.60816110269676,1.95227036798582,0,0.54941678891006,1.32015199872941,0,0,0,2.03008508413456,1.07834031980251,0.767518373630648,0.964856007391714,0.429680979473094,1.30515024522806,0.596586391912706,2.93805717634233,0,0,0,0,0,0.62962469366128,0.6970372701606,0.616067160352178,0.532306030317022,0,0,0.143124886741991,0.744316738719335,1.89827654831236,0.38126038784765,1.27948895655667,0,0.318203247925937,1.56989728039846,1.43897966066652,2.74537029736055,2.23843564456804,0,0,0.421258456238981,0.48763373908959,0,0,0,0.424216295861138,0,0,0,0,0,1.31178950409327,0.811641507850816,2.478587984798,1.12678241012897,2.43799298746888,1.96498082026242,1.78335525740625,0,0.422215270595328,0,2.27683904259429,1.39973888097993,0,0,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0,14.4212496022089,0,0,0,0,0,1.11598390910176,0,0,0,0,0,1.82587743226554,5.17043656050977,0,0,2.40882112655549,2.42159648629257,0.851692475380653,0,0,0,0.333698283423817,0,0,1.23087398947712,0,5.32915148796512,1.4098700508785,0,0,1.69904730449319,0,0,0,0,0.307160702099232,0,0,0.445234820091624,4.12009685566899,3.80025734630388,0,0,3.27512572210559,0,4.30796819113743,0,0,0,4.09257896181497,0,0,0,0,0,0,0,0,0,0,0,0,0,39.9498320335058,0,0,0,0,0,0,0,0.32681539055697,3.20674611840788,0,0,8.99199227113434,7.80891506365018,4.56318962072434,0,0,0,0,0,0,4.73750887296079,4.50943828930801,3.69207491346854,14.8007911524864,0,8.01792645206503,0,28.1292612153542,2.380275037163,0,0,1.83309043480088,5.93042257361244,5.18968543575312,3.34150238417457,0,0,0,0,0.391329237864179,0,0,1.20990716048664,0.30607276163049,0,6.31358361540869,18.7675626429017,0,0,0.313932918407225,1.19472429772959,5.69219092059585,0,0,0,0,0,0.51595809741485,2.0318829570707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| ||
|short_description=p@chr17:47133219..47133223,+ | |short_description=p@chr17:47133219..47133223,+ | ||
}} | }} |
Latest revision as of 18:18, 25 July 2015
Short description: | p@chr17:47133219..47133223, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:47133219..47133223, + |
Coexpression cluster: | C2417_rhabdomyosarcoma_teratocarcinoma_neuroectodermal_neuroepithelioma_colon_medulloblastoma_testic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.50e-08 | 25 |
germ line cell | 3.48e-07 | 7 |
germ cell | 3.48e-07 | 7 |
glial cell (sensu Vertebrata) | 5.07e-07 | 15 |
glial cell | 5.07e-07 | 15 |
glioblast | 5.07e-07 | 15 |
glioblast (sensu Vertebrata) | 5.07e-07 | 15 |
neuron associated cell | 6.51e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.51e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.65e-08 | 10 |
blastocyst | 4.65e-08 | 10 |
blastula | 4.65e-08 | 10 |
bilaminar disc | 4.65e-08 | 10 |
inner cell mass | 4.65e-08 | 10 |
cleaving embryo | 4.65e-08 | 10 |
connecting stalk | 4.65e-08 | 10 |
inner cell mass derived epiblast | 4.65e-08 | 10 |
extraembryonic mesoderm | 4.65e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.66e-15 | 239 |
cancer | 4.11e-15 | 235 |
germ cell and embryonal cancer | 1.38e-14 | 22 |
germ cell cancer | 1.38e-14 | 22 |
cell type cancer | 2.83e-14 | 143 |