FFCP PHASE1:Hg19::chr17:50614541..50614544,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:50614541..50614544,- | |||
|description=CAGE_peak_at_chr17:50614541..50614544,- | |description=CAGE_peak_at_chr17:50614541..50614544,- | ||
|id=chr17:50614541..50614544,- | |id=chr17:50614541..50614544,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000228;9.48e-18;1!CL:0002372;9.48e-18;1!CL:0000039;1.85e-10;7!CL:0000586;1.85e-10;7!CL:0002253;1.51e-09;2!CL:0000322;5.80e-07;3!CL:0002178;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.03e-17,1;CL:0002372,1.03e-17,1;CL:0000039,1.94e-10,7;CL:0000586,1.94e-10,7;CL:0002253,1.33e-09,2;CL:0000322,5.80e-07,3;CL:0002178,7.70e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.37e-07;10!UBERON:0005564;1.37e-07;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.43e-13!143;DOID:305!3.88e-10!106;DOID:162!1.32e-09!235;DOID:14566!2.95e-09!239;DOID:299!3.48e-09!25;DOID:4468!4.08e-09!2 | |ontology_enrichment_disease=DOID:0050687!1.43e-13!143;DOID:305!3.88e-10!106;DOID:162!1.32e-09!235;DOID:14566!2.95e-09!239;DOID:299!3.48e-09!25;DOID:4468!4.08e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:1325;1.64e-10;7!DOID:3904;1.64e-10;7!DOID:3910;7.98e-10;2!DOID:4468;8.69e-10;2!DOID:3905;2.25e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,1.94e-10,7;DOID:3904,1.94e-10,7;DOID:3910,7.98e-10,2;DOID:4468,8.69e-10,2;DOID:3905,2.55e-08,9;DOID:305,2.87e-07,106;DOID:0050687,7.53e-07,143 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;7.98e-10;2!UBERON:0002173;7.98e-10;2!UBERON:0002186;7.98e-10;2!UBERON:0000473;2.89e-09;8!UBERON:0003135;5.63e-07;11!UBERON:0004821;5.80e-07;3!UBERON:0007499;5.80e-07;3!UBERON:0003215;5.80e-07;3!UBERON:0010368;5.80e-07;3!UBERON:0009911;5.80e-07;3!UBERON:0002299;5.80e-07;3!UBERON:0006524;5.80e-07;3!UBERON:0008874;5.80e-07;3!UBERON:0002169;5.80e-07;3!UBERON:0004894;5.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,7.98e-10,2;UBERON:0002173,7.98e-10,2;UBERON:0002186,7.98e-10,2;UBERON:0000473,3.01e-09,8;UBERON:0004821,5.80e-07,3;UBERON:0003215,5.80e-07,3;UBERON:0010368,5.80e-07,3;UBERON:0009911,5.80e-07,3;UBERON:0002299,5.80e-07,3;UBERON:0006524,5.80e-07,3;UBERON:0008874,5.80e-07,3;UBERON:0002169,5.80e-07,3;UBERON:0004894,5.80e-07,3;UBERON:0003135,5.81e-07,11 | |||
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| ||
|short_description=p@chr17:50614541..50614544,- | |short_description=p@chr17:50614541..50614544,- | ||
}} | }} |
Latest revision as of 18:57, 25 July 2015
Short description: | p@chr17:50614541..50614544, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:50614541..50614544, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.03e-17 | 1 |
myotube | 1.03e-17 | 1 |
germ line cell | 1.94e-10 | 7 |
germ cell | 1.94e-10 | 7 |
epithelial cell of large intestine | 1.33e-09 | 2 |
pneumocyte | 5.80e-07 | 3 |
epithelial cell of stomach | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 7.98e-10 | 2 |
alveolar duct | 7.98e-10 | 2 |
bronchiole | 7.98e-10 | 2 |
testis | 3.01e-09 | 8 |
pulmonary alveolus epithelium | 5.80e-07 | 3 |
alveolus | 5.80e-07 | 3 |
pulmonary lobule | 5.80e-07 | 3 |
lobule | 5.80e-07 | 3 |
alveolus of lung | 5.80e-07 | 3 |
alveolar system | 5.80e-07 | 3 |
pulmonary acinus | 5.80e-07 | 3 |
alveolar sac | 5.80e-07 | 3 |
alveolar wall | 5.80e-07 | 3 |
male reproductive organ | 5.81e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 1.94e-10 | 7 |
bronchogenic carcinoma | 1.94e-10 | 7 |
lung adenocarcinoma | 7.98e-10 | 2 |
clear cell adenocarcinoma | 8.69e-10 | 2 |
lung carcinoma | 2.55e-08 | 9 |
carcinoma | 2.87e-07 | 106 |
cell type cancer | 7.53e-07 | 143 |