FFCP PHASE1:Hg19::chr17:66077866..66077872,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:66077866..66077872,+ | |||
|coexpression_cluster_id=C330 | |||
|description=CAGE_peak_at_chr17:66077866..66077872,+ | |description=CAGE_peak_at_chr17:66077866..66077872,+ | ||
|id=chr17:66077866..66077872,+ | |id=chr17:66077866..66077872,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.00e-14;1!CL:0000911;1.00e-14;1!CL:0000814;1.00e-14;1!CL:0000123;8.04e-08;2!CL:0000242;8.04e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,9.36e-15,1;CL:0000914,9.36e-15,1;CL:0000911,9.36e-15,1;CL:0000814,9.36e-15,1;CL:0002042,9.36e-15,1;CL:0002039,9.36e-15,1;CL:0002040,9.36e-15,1;CL:0002041,9.36e-15,1;CL:0000893,5.02e-08,2;CL:0002489,5.02e-08,2;CL:0000809,5.02e-08,2;CL:0000808,5.02e-08,2;CL:0000894,5.02e-08,2;CL:0000806,5.02e-08,2;CL:0000807,5.02e-08,2;CL:0000805,5.02e-08,2;CL:0002425,5.02e-08,2;CL:0000242,7.52e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002425;5.19e-08;2 | |||
|ontology_enrichment_disease=DOID:162!2.27e-26!235;DOID:14566!2.17e-25!239;DOID:0050687!9.34e-19!143;DOID:305!2.85e-15!106;DOID:0050686!6.87e-12!137;DOID:1749!6.78e-09!14;DOID:1036!3.06e-08!8 | |ontology_enrichment_disease=DOID:162!2.27e-26!235;DOID:14566!2.17e-25!239;DOID:0050687!9.34e-19!143;DOID:305!2.85e-15!106;DOID:0050686!6.87e-12!137;DOID:1749!6.78e-09!14;DOID:1036!3.06e-08!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;2.68e-15;8!DOID:6193;7.63e-15;1!DOID:3910;3.82e-08;2!DOID:3350;4.53e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.68e-15,8;DOID:6193,7.13e-15,1;DOID:3910,3.82e-08,2;DOID:3350,4.38e-08,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.82e-08;2!UBERON:0002173;3.82e-08;2!UBERON:0002186;3.82e-08;2!UBERON:0000473;1.06e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.82e-08,2;UBERON:0002173,3.82e-08,2;UBERON:0002186,3.82e-08,2;UBERON:0000473,1.07e-07,8 | |||
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| ||
|short_description=p@chr17:66077866..66077872,+ | |short_description=p@chr17:66077866..66077872,+ | ||
}} | }} |
Latest revision as of 20:09, 25 July 2015
Short description: | p@chr17:66077866..66077872, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:66077866..66077872, + |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 9.36e-15 | 1 |
immature NK T cell | 9.36e-15 | 1 |
effector T cell | 9.36e-15 | 1 |
mature NK T cell | 9.36e-15 | 1 |
immature NK T cell stage IV | 9.36e-15 | 1 |
immature NK T cell stage I | 9.36e-15 | 1 |
immature NK T cell stage II | 9.36e-15 | 1 |
immature NK T cell stage III | 9.36e-15 | 1 |
thymocyte | 5.02e-08 | 2 |
double negative thymocyte | 5.02e-08 | 2 |
double-positive, alpha-beta thymocyte | 5.02e-08 | 2 |
DN4 thymocyte | 5.02e-08 | 2 |
DN1 thymic pro-T cell | 5.02e-08 | 2 |
DN2 thymocyte | 5.02e-08 | 2 |
DN3 thymocyte | 5.02e-08 | 2 |
immature single positive thymocyte | 5.02e-08 | 2 |
early T lineage precursor | 5.02e-08 | 2 |
Merkel cell | 7.52e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.82e-08 | 2 |
alveolar duct | 3.82e-08 | 2 |
bronchiole | 3.82e-08 | 2 |
testis | 1.07e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.68e-15 | 8 |
epithelioid sarcoma | 7.13e-15 | 1 |
lung adenocarcinoma | 3.82e-08 | 2 |
mesenchymal cell neoplasm | 4.38e-08 | 2 |