FFCP PHASE1:Hg19::chr17:73750800..73750821,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:73750800..73750821,+ | |||
|coexpression_cluster_id=C436 | |coexpression_cluster_id=C436 | ||
|description=CAGE_peak_at_chr17:73750800..73750821,+ | |description=CAGE_peak_at_chr17:73750800..73750821,+ | ||
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|ontology_enrichment_celltype=CL:0000066!8.70e-28!254;CL:0002076!2.39e-21!43;CL:0000223!5.82e-19!59;CL:0002251!2.28e-11!21;CL:0002368!5.91e-10!13;CL:0002077!9.87e-10!33;CL:0002159!2.03e-09!13;CL:0000076!4.60e-09!62 | |ontology_enrichment_celltype=CL:0000066!8.70e-28!254;CL:0002076!2.39e-21!43;CL:0000223!5.82e-19!59;CL:0002251!2.28e-11!21;CL:0002368!5.91e-10!13;CL:0002077!9.87e-10!33;CL:0002159!2.03e-09!13;CL:0000076!4.60e-09!62 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.95e-22;42!CL:0002159;8.48e-22;14!CL:0002251;5.45e-20;20!CL:0000622;8.12e-17;5!CL:0000154;5.99e-14;6!CL:0000244;7.33e-14;4!CL:0000731;7.33e-14;4!CL:0002623;1.45e-10;3!CL:0002166;6.08e-10;3!CL:0002621;1.07e-09;3!CL:0002077;1.21e-09;34!CL:0000362;2.44e-09;9!CL:0000240;2.49e-09;6!CL:0000311;2.49e-09;6!CL:0000079;2.49e-09;6!CL:0000237;2.49e-09;6!CL:0000150;3.69e-09;9!CL:0002368;1.57e-08;13!CL:0002327;4.28e-08;4!CL:0000317;5.83e-08;2!CL:1000448;5.83e-08;2!CL:0002308;5.83e-08;2!CL:0002140;5.83e-08;2!CL:0000575;9.25e-08;2 | |ontology_enrichment_celltype_v019=CL:0002076;1.95e-22;42!CL:0002159;8.48e-22;14!CL:0002251;5.45e-20;20!CL:0000622;8.12e-17;5!CL:0000154;5.99e-14;6!CL:0000244;7.33e-14;4!CL:0000731;7.33e-14;4!CL:0002623;1.45e-10;3!CL:0002166;6.08e-10;3!CL:0002621;1.07e-09;3!CL:0002077;1.21e-09;34!CL:0000362;2.44e-09;9!CL:0000240;2.49e-09;6!CL:0000311;2.49e-09;6!CL:0000079;2.49e-09;6!CL:0000237;2.49e-09;6!CL:0000150;3.69e-09;9!CL:0002368;1.57e-08;13!CL:0002327;4.28e-08;4!CL:0000317;5.83e-08;2!CL:1000448;5.83e-08;2!CL:0002308;5.83e-08;2!CL:0002140;5.83e-08;2!CL:0000575;9.25e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.58e-29,253;CL:0002076,3.32e-28,42;CL:0002159,6.06e-22,14;CL:0000223,5.68e-21,58;CL:0002251,3.75e-20,20;CL:0000622,8.86e-17,5;CL:0000154,6.44e-14,6;CL:0000244,8.52e-14,4;CL:0000731,8.52e-14,4;CL:0002077,3.44e-11,34;CL:0002623,1.58e-10,3;CL:0002166,4.21e-10,3;CL:0002621,5.92e-10,3;CL:0000362,2.31e-09,9;CL:0000240,2.37e-09,6;CL:0000311,2.37e-09,6;CL:0000079,2.37e-09,6;CL:0000237,2.37e-09,6;CL:0000036,2.37e-09,6;CL:0000357,2.37e-09,6;CL:0000114,2.37e-09,6;CL:0000076,3.33e-09,63;CL:0000150,3.87e-09,9;CL:0002368,1.87e-08,13;CL:0002327,3.68e-08,4;CL:0002321,4.13e-08,250;CL:0000317,5.85e-08,2;CL:1000448,5.85e-08,2;CL:0002308,5.85e-08,2;CL:0002140,5.85e-08,2;CL:0000575,9.28e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000223;2.49e-11;58!CL:0000357;2.49e-09;6!CL:0000114;2.49e-09;6 | |ontology_enrichment_development_v019=CL:0000223;2.49e-11;58!CL:0000357;2.49e-09;6!CL:0000114;2.49e-09;6 | ||
|ontology_enrichment_disease=DOID:305!1.25e-11!106;DOID:1749!2.99e-09!14;DOID:0050687!5.39e-09!143 | |ontology_enrichment_disease=DOID:305!1.25e-11!106;DOID:1749!2.99e-09!14;DOID:0050687!5.39e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:4929;3.95e-07;2 | |ontology_enrichment_disease_v019=DOID:4929;3.95e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4929,5.83e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.68e-15!169;UBERON:0000925!7.68e-15!169;UBERON:0006595!7.68e-15!169;UBERON:0000924!1.59e-11!173;UBERON:0006601!1.59e-11!173;UBERON:0000033!2.80e-11!123;UBERON:0004121!8.01e-11!169;UBERON:0000153!2.26e-10!129;UBERON:0007811!2.26e-10!129;UBERON:0001007!1.08e-09!155;UBERON:0001555!1.08e-09!155;UBERON:0007026!1.08e-09!155;UBERON:0002346!1.25e-08!90;UBERON:0000062!1.44e-08!511;UBERON:0000077!2.46e-08!130;UBERON:0003075!6.21e-08!86;UBERON:0007284!6.21e-08!86;UBERON:0004921!7.95e-08!129;UBERON:0004185!7.95e-08!129;UBERON:0000064!1.72e-07!219;UBERON:0001049!4.28e-07!57;UBERON:0005068!4.28e-07!57;UBERON:0006241!4.28e-07!57;UBERON:0007135!4.28e-07!57;UBERON:0001004!7.37e-07!72 | |ontology_enrichment_uberon=UBERON:0004119!7.68e-15!169;UBERON:0000925!7.68e-15!169;UBERON:0006595!7.68e-15!169;UBERON:0000924!1.59e-11!173;UBERON:0006601!1.59e-11!173;UBERON:0000033!2.80e-11!123;UBERON:0004121!8.01e-11!169;UBERON:0000153!2.26e-10!129;UBERON:0007811!2.26e-10!129;UBERON:0001007!1.08e-09!155;UBERON:0001555!1.08e-09!155;UBERON:0007026!1.08e-09!155;UBERON:0002346!1.25e-08!90;UBERON:0000062!1.44e-08!511;UBERON:0000077!2.46e-08!130;UBERON:0003075!6.21e-08!86;UBERON:0007284!6.21e-08!86;UBERON:0004921!7.95e-08!129;UBERON:0004185!7.95e-08!129;UBERON:0000064!1.72e-07!219;UBERON:0001049!4.28e-07!57;UBERON:0005068!4.28e-07!57;UBERON:0006241!4.28e-07!57;UBERON:0007135!4.28e-07!57;UBERON:0001004!7.37e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.89e-12;12!UBERON:0000365;4.38e-11;5!UBERON:0001949;1.07e-09;3!UBERON:0000161;2.53e-09;19!UBERON:0000166;2.53e-09;19!UBERON:0005910;3.14e-09;6!UBERON:0010371;3.89e-08;31!UBERON:0003729;4.26e-08;13!UBERON:0001911;4.28e-08;4!UBERON:0002419;5.83e-08;2!UBERON:0007771;5.83e-08;2!UBERON:0003297;5.83e-08;2!UBERON:0001821;5.83e-08;2!UBERON:0003487;5.83e-08;2!UBERON:0001820;5.83e-08;2!UBERON:0001708;1.49e-07;4!UBERON:0008895;1.49e-07;4!UBERON:0000165;1.50e-07;28 | |ontology_enrichment_uberon_v019=UBERON:0000486;2.89e-12;12!UBERON:0000365;4.38e-11;5!UBERON:0001949;1.07e-09;3!UBERON:0000161;2.53e-09;19!UBERON:0000166;2.53e-09;19!UBERON:0005910;3.14e-09;6!UBERON:0010371;3.89e-08;31!UBERON:0003729;4.26e-08;13!UBERON:0001911;4.28e-08;4!UBERON:0002419;5.83e-08;2!UBERON:0007771;5.83e-08;2!UBERON:0003297;5.83e-08;2!UBERON:0001821;5.83e-08;2!UBERON:0003487;5.83e-08;2!UBERON:0001820;5.83e-08;2!UBERON:0001708;1.49e-07;4!UBERON:0008895;1.49e-07;4!UBERON:0000165;1.50e-07;28 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,4.93e-11,5;UBERON:0004119,1.04e-10,160;UBERON:0000925,1.04e-10,160;UBERON:0006595,1.04e-10,160;UBERON:0000033,1.52e-10,56;UBERON:0003102,3.76e-10,99;UBERON:0001949,5.92e-10,3;UBERON:0005910,3.46e-09,6;UBERON:0000153,3.68e-09,62;UBERON:0007811,3.68e-09,62;UBERON:0003729,3.39e-08,13;UBERON:0001911,3.68e-08,4;UBERON:0005333,3.68e-08,4;UBERON:0008425,3.68e-08,4;UBERON:0005311,3.68e-08,4;UBERON:0001444,5.50e-08,49;UBERON:0002419,5.85e-08,2;UBERON:0007771,5.85e-08,2;UBERON:0003297,5.85e-08,2;UBERON:0001821,5.85e-08,2;UBERON:0003487,5.85e-08,2;UBERON:0001820,5.85e-08,2;UBERON:0005089,5.85e-08,2;UBERON:0005088,5.85e-08,2;UBERON:0000166,6.20e-08,22;UBERON:0001708,1.13e-07,4;UBERON:0008895,1.13e-07,4;UBERON:0000165,2.76e-07,29;UBERON:0000930,2.76e-07,29;UBERON:0000161,5.88e-07,36;UBERON:0005085,6.82e-07,31;UBERON:0000344,9.95e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.873765488520689,1.31883489114227,0,0.331397375727916,0,0,0,0,0.492484232307152,0,0.626909442956176,0.286235987131057,0.136874425072884,0.502170558379211,0,0.0821005894499457,0,0,0,0,0.919421224478927,0.6024118375565,2.9580320813343,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0.351339142772504,0.0654895377488563,4.00724817121796,4.82019775619758,0,0,0,0.476981248610684,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93260853163297,3.00020732649918,1.72082757233402,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,1.3725424823882,9.54827483055042,3.37205259772859,5.62962245505133,5.09236448371913,0,0,1.44331342025273,0.231860809950154,0.117408694235822,0,0,0,1.58040879591855,0.858486162094873,0,0,0,2.81201501960331,3.19166043577833,1.84307626415102,3.58234090811393,4.65014301622339,4.60059214998253,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.473107245101804,0.35142424497814,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,1.66435439510497,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,15.8400111539595,4.32780647998713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0,0,4.59412430396938,18.2016868890226,0,0,0,0,0,0,0,0.0852266274161009,0,5.45440220691228,6.1500821556834,10.3366297120613,3.13589120652205,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,0.670302275535787,1.08890984861323,0.0941438007767792,6.02707521739722,13.47771805341,3.10401107475673,3.21612760289743,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,1.19372242368845,0,1.53580351049616,0,0.281338832821026,0,0,0,0.19924798825107,1.10513566212459,0,0.102268682502155,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,2.95862965542299,0.508507300585533,0.472775363535873,0,0,0,1.77148277162768,0.120596438625408,0,0.110579259931225,0,0,0,0.975966209950223,0.0769502585037971,0,0.46112780877612,0.987334088507493,0.651884231532048,0.31900115973192,0.549585560411174,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0.158936578980379,0,0,0.282706142867882,0,0,0.0884575645033392,0.611030144933625,0,0.123563938946503,0,0.134802265961354,0,0.234264445725339,0,0.391329237864179,0.242780379534093,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0.992975867626496,0.941798755221676,1.19472429772959,0,0,0.173559738335131,0.587954384486266,0.34823682632161,0.17472666824203,0.171986032471617,0,0.0730893170861856,0.246346371159628,0.0969890164884194,0,0,0,0,0.0633107959558787,1.36885967914362,0,0.640358984218058,0.599428828746391,1.15272333723285,0,0,0.720273989940749,0,1.41416420770077,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.599037001496973,0.429226048136571,0,0,0,0,0.472699093843342,0.247247575143499,0.202210631562555,0,0.0846733320657845,0,0.272406812223151,0,0,0,0,0,0,1.0063040627978,0.0788057072991982,0,0,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0.828478110694391,0,0,0,1.27668251554036,0,0,0,0,0,0,0.244052529803926,0.1251909307065,1.14681839138014,0.554645257684261,0.124192805882767,0.138348634936231,0.37494122388632,0,0,0.705797459094515,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0.857766365499703,0.782982875895635,0,0,0.489473409012935,3.22359913946677,2.47041157728778,0.877136198314828,0.176689145945881,1.3503982678964,0.675769762612291,0,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0,1.47918486351039,0,0.106691729694141,0.172214979660816,0,0,1.53867458491389,1.86623178009892,0,0,0,0,0,0.425149840203366,0.247871528518004,0,0,0,0,0.352675943690684,0,0,0,0.319267718114302,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0.981477185010256,0.235939446695481,4.58571496304198,1.38630799380406,0,0,0,0.150420656698515,0,0.781514011233092,0.523813388962845,1.31017534008077,1.03499260351932,0,0.781078098613847,0.206686796501184,0.0634158101939068,0,0,0.992422356778588,0.175871244359621,1.78867398695433,0,0,0.606965604236632,0,0.266107110487916,0,0,0.135939465953663,0,0.236387681767936,0.667388411352415,0.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| ||
|short_description=p@chr17:73750800..73750821,+ | |short_description=p@chr17:73750800..73750821,+ | ||
}} | }} |
Latest revision as of 21:12, 25 July 2015
Short description: | p@chr17:73750800..73750821, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73750800..73750821, + |
Coexpression cluster: | C436_Sebocyte_Prostate_Keratinocyte_Urothelial_Small_Mammary_salivary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 4.93e-11 | 5 |
endoderm-derived structure | 1.04e-10 | 160 |
endoderm | 1.04e-10 | 160 |
presumptive endoderm | 1.04e-10 | 160 |
head | 1.52e-10 | 56 |
surface structure | 3.76e-10 | 99 |
gingival epithelium | 5.92e-10 | 3 |
transitional epithelium | 3.46e-09 | 6 |
anterior region of body | 3.68e-09 | 62 |
craniocervical region | 3.68e-09 | 62 |
mouth mucosa | 3.39e-08 | 13 |
mammary gland | 3.68e-08 | 4 |
mammary bud | 3.68e-08 | 4 |
mammary ridge | 3.68e-08 | 4 |
mammary placode | 3.68e-08 | 4 |
subdivision of head | 5.50e-08 | 49 |
skin gland | 5.85e-08 | 2 |
epidermis gland | 5.85e-08 | 2 |
gland of integumental system | 5.85e-08 | 2 |
sebaceous gland | 5.85e-08 | 2 |
skin sebaceous gland | 5.85e-08 | 2 |
sweat gland | 5.85e-08 | 2 |
sweat gland placode | 5.85e-08 | 2 |
sebaceous gland placode | 5.85e-08 | 2 |
oral opening | 6.20e-08 | 22 |
jaw skeleton | 1.13e-07 | 4 |
splanchnocranium | 1.13e-07 | 4 |
mouth | 2.76e-07 | 29 |
stomodeum | 2.76e-07 | 29 |
orifice | 5.88e-07 | 36 |
ectodermal placode | 6.82e-07 | 31 |
mucosa | 9.95e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 5.83e-07 | 2 |