FFCP PHASE1:Hg19::chr17:74528128..74528143,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:74528128..74528143,- | |||
|description=CAGE_peak_at_chr17:74528128..74528143,- | |description=CAGE_peak_at_chr17:74528128..74528143,- | ||
|id=chr17:74528128..74528143,- | |id=chr17:74528128..74528143,- | ||
|ontology_enrichment_celltype=CL:0000325!6.83e-13!39;CL:0002077!1.59e-11!33;CL:0002076!3.26e-11!43;CL:0000066!4.06e-11!254;CL:0002159!3.51e-10!13;CL:0002334!7.78e-10!12;CL:0002368!3.07e-09!13;CL:0002621!5.90e-08!3;CL:0002166!6.89e-08!3;CL:0002567!1.50e-07!3;CL:0002580!2.21e-07!3;CL:0000148!2.57e-07!10;CL:0000541!2.57e-07!10;CL:0000068!3.72e-07!3;CL:0000069!3.72e-07!3;CL:0000307!3.72e-07!3;CL:0000377!3.72e-07!3;CL:0000362!5.91e-07!8;CL:0000223!6.27e-07!59;CL:0002541!9.69e-07!3 | |ontology_enrichment_celltype=CL:0000325!6.83e-13!39;CL:0002077!1.59e-11!33;CL:0002076!3.26e-11!43;CL:0000066!4.06e-11!254;CL:0002159!3.51e-10!13;CL:0002334!7.78e-10!12;CL:0002368!3.07e-09!13;CL:0002621!5.90e-08!3;CL:0002166!6.89e-08!3;CL:0002567!1.50e-07!3;CL:0002580!2.21e-07!3;CL:0000148!2.57e-07!10;CL:0000541!2.57e-07!10;CL:0000068!3.72e-07!3;CL:0000069!3.72e-07!3;CL:0000307!3.72e-07!3;CL:0000377!3.72e-07!3;CL:0000362!5.91e-07!8;CL:0000223!6.27e-07!59;CL:0002541!9.69e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002159;3.18e-24;14!CL:0002166;4.84e-22;3!CL:0002621;4.84e-22;3!CL:0002567;1.00e-20;3!CL:0002077;8.43e-20;34!CL:0000317;2.62e-15;2!CL:1000448;2.62e-15;2!CL:0002308;2.62e-15;2!CL:0002140;2.62e-15;2!CL:0000362;5.61e-13;9!CL:0000148;5.92e-11;10!CL:0002580;3.84e-10;3!CL:0002591;4.72e-08;1!CL:0000147;7.25e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,3.60e-24,14;CL:0002077,7.21e-23,34;CL:0002621,3.78e-22,3;CL:0002166,6.21e-22,3;CL:0002567,7.64e-21,3;CL:0000317,2.05e-15,2;CL:1000448,2.05e-15,2;CL:0002308,2.05e-15,2;CL:0002140,2.05e-15,2;CL:0000362,5.62e-13,9;CL:0000148,5.05e-11,10;CL:0000541,5.05e-11,10;CL:0002580,3.93e-10,3;CL:0000221,1.87e-09,72;CL:0000066,4.38e-08,253;CL:0002591,5.43e-08,1;CL:0000147,6.49e-08,14;CL:0002076,2.68e-07,42;CL:0002321,4.08e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!5.90e-08!3;UBERON:0000476!9.69e-07!3;UBERON:0000920!9.69e-07!3 | |ontology_enrichment_uberon=UBERON:0001949!5.90e-08!3;UBERON:0000476!9.69e-07!3;UBERON:0000920!9.69e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.84e-22;3!UBERON:0001708;1.11e-16;4!UBERON:0008895;1.11e-16;4!UBERON:0002419;2.62e-15;2!UBERON:0007771;2.62e-15;2!UBERON:0003297;2.62e-15;2!UBERON:0001821;2.62e-15;2!UBERON:0003487;2.62e-15;2!UBERON:0001820;2.62e-15;2!UBERON:0010371;1.11e-13;31!UBERON:0011159;1.87e-13;5!UBERON:0003929;9.42e-10;7!UBERON:0000486;1.42e-09;12!UBERON:0003729;7.61e-09;13!UBERON:0003350;1.37e-08;8!UBERON:0001828;1.37e-08;8!UBERON:0001003;7.90e-08;15!UBERON:0007376;7.90e-08;15!UBERON:0000310;8.89e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.78e-22,3;UBERON:0010188,7.19e-19,6;UBERON:0002539,7.19e-19,6;UBERON:0008816,7.19e-19,6;UBERON:0001708,1.34e-16,4;UBERON:0008895,1.34e-16,4;UBERON:0002419,2.05e-15,2;UBERON:0007771,2.05e-15,2;UBERON:0003297,2.05e-15,2;UBERON:0001821,2.05e-15,2;UBERON:0003487,2.05e-15,2;UBERON:0001820,2.05e-15,2;UBERON:0005089,2.05e-15,2;UBERON:0005088,2.05e-15,2;UBERON:0011159,2.17e-13,5;UBERON:0003102,1.43e-09,99;UBERON:0003729,7.53e-09,13;UBERON:0003350,1.25e-08,8;UBERON:0001828,1.25e-08,8;UBERON:0001003,7.90e-08,15;UBERON:0007376,7.90e-08,15;UBERON:0007383,7.90e-08,15;UBERON:0000033,7.02e-07,56;UBERON:0000310,9.25e-07,10 | |||
|phase1_expression=2.36181893051724,0.642301571672949,3.24195129420734,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83152132908242,2.72746120590835,2.86804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,6.69476740992616,2.24803506515239,0.201057944823262,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,4.68669169933885,2.35174979478403,2.41017665312057,0,0,0.383382679165211,0,0,0,0,0,0.253991577168676,1.14596527667483,1.17217447210047,1.71072446022705,1.23392991243988,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,2.23297027036899,0.460385919864187,1.40330047216537,2.94720043288112,0,0.64341568457443,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0,3.80962293576241,0,0.229628896329213,0,0.131124414959424,0.451199612907412,0.616122696835318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87132768998086,3.25030123018261,0,0,0,0,0,0,0,0,0,0.661139661443912,0.576570202095319,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0.48111056362756,0.670302275535787,1.08890984861323,0,1.29151611801369,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0.31900115973192,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0,0,0,1.95879369790977,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,1.21491816834592,0.195984794828755,0.261177619741208,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0.195551382734803,0.480952921509202,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10057159113007,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782988022584546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0.917899467677836,0,2.84874188558019,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 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|phase1_expression=2.36181893051724,0.642301571672949,3.24195129420734,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83152132908242,2.72746120590835,2.86804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,6.69476740992616,2.24803506515239,0.201057944823262,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,4.68669169933885,2.35174979478403,2.41017665312057,0,0,0.383382679165211,0,0,0,0,0,0.253991577168676,1.14596527667483,1.17217447210047,1.71072446022705,1.23392991243988,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,2.23297027036899,0.460385919864187,1.40330047216537,2.94720043288112,0,0.64341568457443,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0,3.80962293576241,0,0.229628896329213,0,0.131124414959424,0.451199612907412,0.616122696835318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87132768998086,3.25030123018261,0,0,0,0,0,0,0,0,0,0.661139661443912,0.576570202095319,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0.48111056362756,0.670302275535787,1.08890984861323,0,1.29151611801369,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0.31900115973192,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0,0,0,1.95879369790977,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,1.21491816834592,0.195984794828755,0.261177619741208,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0.195551382734803,0.480952921509202,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10057159113007,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782988022584546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0.917899467677836,0,2.84874188558019,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:74528128..74528143,- | |short_description=p@chr17:74528128..74528143,- | ||
}} | }} |
Latest revision as of 21:27, 25 July 2015
Short description: | p@chr17:74528128..74528143, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:74528128..74528143, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 3.60e-24 | 14 |
ecto-epithelial cell | 7.21e-23 | 34 |
gingival epithelial cell | 3.78e-22 | 3 |
epithelial cell of Malassez | 6.21e-22 | 3 |
light melanocyte | 7.64e-21 | 3 |
sebum secreting cell | 2.05e-15 | 2 |
epithelial cell of sweat gland | 2.05e-15 | 2 |
epithelial cell of skin gland | 2.05e-15 | 2 |
acinar cell of sebaceous gland | 2.05e-15 | 2 |
epidermal cell | 5.62e-13 | 9 |
melanocyte | 5.05e-11 | 10 |
melanoblast | 5.05e-11 | 10 |
preadipocyte of the breast | 3.93e-10 | 3 |
ectodermal cell | 1.87e-09 | 72 |
epithelial cell | 4.38e-08 | 253 |
smooth muscle cell of the pulmonary artery | 5.43e-08 | 1 |
pigment cell | 6.49e-08 | 14 |
endo-epithelial cell | 2.68e-07 | 42 |
embryonic cell | 4.08e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.78e-22 | 3 |
protuberance | 7.19e-19 | 6 |
pharyngeal arch | 7.19e-19 | 6 |
embryonic head | 7.19e-19 | 6 |
jaw skeleton | 1.34e-16 | 4 |
splanchnocranium | 1.34e-16 | 4 |
skin gland | 2.05e-15 | 2 |
epidermis gland | 2.05e-15 | 2 |
gland of integumental system | 2.05e-15 | 2 |
sebaceous gland | 2.05e-15 | 2 |
skin sebaceous gland | 2.05e-15 | 2 |
sweat gland | 2.05e-15 | 2 |
sweat gland placode | 2.05e-15 | 2 |
sebaceous gland placode | 2.05e-15 | 2 |
primary subdivision of cranial skeletal system | 2.17e-13 | 5 |
surface structure | 1.43e-09 | 99 |
mouth mucosa | 7.53e-09 | 13 |
epithelium of mucosa | 1.25e-08 | 8 |
gingiva | 1.25e-08 | 8 |
skin epidermis | 7.90e-08 | 15 |
outer epithelium | 7.90e-08 | 15 |
enveloping layer of ectoderm | 7.90e-08 | 15 |
head | 7.02e-07 | 56 |
breast | 9.25e-07 | 10 |