FFCP PHASE1:Hg19::chr17:79366155..79366168,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:79366155..79366168,+ | |||
|description=CAGE_peak_at_chr17:79366155..79366168,+ | |description=CAGE_peak_at_chr17:79366155..79366168,+ | ||
|id=chr17:79366155..79366168,+ | |id=chr17:79366155..79366168,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.54e-12;9!CL:0000447;2.54e-12;9!CL:0002575;7.91e-10;2!CL:0000327;2.79e-07;15!CL:0000135;3.57e-07;3!CL:0000388;3.57e-07;3!CL:0000138;3.59e-07;6!CL:0002567;4.41e-07;3!CL:0000214;4.41e-07;3!CL:0000499;4.91e-07;28 | |ontology_enrichment_celltype_v019=CL:0000153;2.54e-12;9!CL:0000447;2.54e-12;9!CL:0002575;7.91e-10;2!CL:0000327;2.79e-07;15!CL:0000135;3.57e-07;3!CL:0000388;3.57e-07;3!CL:0000138;3.59e-07;6!CL:0002567;4.41e-07;3!CL:0000214;4.41e-07;3!CL:0000499;4.91e-07;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0000153,3.18e-12,9;CL:0000447,3.18e-12,9;CL:0002575,1.14e-09,2;CL:0000135,2.40e-07,3;CL:0000388,2.40e-07,3;CL:0002567,2.98e-07,3;CL:0000327,3.17e-07,15;CL:0000214,4.05e-07,3;CL:0000058,4.67e-07,6;CL:0000138,4.67e-07,6;CL:0000499,4.74e-07,28 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.83e-15!115;UBERON:0000475!1.24e-09!365;UBERON:0002616!3.69e-09!59;UBERON:0002346!6.00e-08!90;UBERON:0003075!7.30e-08!86;UBERON:0007284!7.30e-08!86;UBERON:0001049!9.50e-08!57;UBERON:0005068!9.50e-08!57;UBERON:0006241!9.50e-08!57;UBERON:0007135!9.50e-08!57;UBERON:0000153!1.53e-07!129;UBERON:0007811!1.53e-07!129;UBERON:0000033!4.64e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!2.83e-15!115;UBERON:0000475!1.24e-09!365;UBERON:0002616!3.69e-09!59;UBERON:0002346!6.00e-08!90;UBERON:0003075!7.30e-08!86;UBERON:0007284!7.30e-08!86;UBERON:0001049!9.50e-08!57;UBERON:0005068!9.50e-08!57;UBERON:0006241!9.50e-08!57;UBERON:0007135!9.50e-08!57;UBERON:0000153!1.53e-07!129;UBERON:0007811!1.53e-07!129;UBERON:0000033!4.64e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0004905;3.25e-09;8!UBERON:0000982;3.25e-09;8!UBERON:0004770;3.25e-09;8!UBERON:0004457;3.39e-08;9!UBERON:0000042;3.39e-08;9!UBERON:0007846;3.57e-07;3!UBERON:0000043;3.57e-07;3!UBERON:0007845;3.57e-07;3!UBERON:0006915;4.41e-07;3!UBERON:0007616;4.41e-07;3!UBERON:0002217;4.41e-07;3!UBERON:0002018;4.41e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004905;3.25e-09;8!UBERON:0000982;3.25e-09;8!UBERON:0004770;3.25e-09;8!UBERON:0004457;3.39e-08;9!UBERON:0000042;3.39e-08;9!UBERON:0007846;3.57e-07;3!UBERON:0000043;3.57e-07;3!UBERON:0007845;3.57e-07;3!UBERON:0006915;4.41e-07;3!UBERON:0007616;4.41e-07;3!UBERON:0002217;4.41e-07;3!UBERON:0002018;4.41e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,3.07e-09,8;UBERON:0000982,3.07e-09,8;UBERON:0004770,3.07e-09,8;UBERON:0007846,2.40e-07,3;UBERON:0000043,2.40e-07,3;UBERON:0007845,2.40e-07,3;UBERON:0006915,4.05e-07,3;UBERON:0007616,4.05e-07,3;UBERON:0002217,4.05e-07,3;UBERON:0002018,4.05e-07,3 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.704772020479856,1.0007329835313,0,1.74467704820074,0,0,0.261185628199839,0,0.697801167972428,0,0,0.495065411840187,1.98838425436749,0,0,0,0,0.61560529038394,0.612002073732759,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0.293600439334847,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.50401373190767,1.01392563272577,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0.549605231791222,0,0,0,0.993943903390637,0,0.132409180813219,0.860509862246441,0,0,0,0,1.24484414159907,0,0,0.302714855289863,0.576175924479999,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0.204154171254893,0.737005903870608,1.03325781175765,0,0.494533858557114,0,1.43723628363248,0.168336113954066,0.125118519871964,0,0,0,0.751190294532984,0,0.358779271377724,0.213557388818567,0.423863802319124,0.300091096084402,0.206105058476878,0.772921620136887,0,0.168776332241266,0.0974370051611986,0.757301322732344,0.736399189138395,1.13152239773168,0.710019185033229,0.503760491138201,0,0.193260853163297,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0.507983154337352,1.90994212779139,2.34434894420094,0,0.514137463516618,0.600686115687835,0.285826432630578,0.224262168690721,0.43596006883328,0.07333828582095,0,7.15312891703765,0,0,0,0.257207374262142,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,0.271265023699736,0,0.356857977594324,0.315404830067869,0.468565659970853,0.601892199455438,0,0,0,0,0.173767228936166,1.37060810223918,1.02943027143257,0,0.215714200818617,0,0,0,0,0.248107807818777,0.306923946576125,0.841980283299221,0.768834895534206,1.02341449813341,0,0,0,0,0.164254312027618,0,0.232420756919918,0,0,0.0920809889358963,0,0.182091168006717,0.524497659837696,0,0.0770153371044148,0,1.46139224653261,0,1.13733384070897,0,0,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0,0.082509499920588,0,0,0,0.290012154876366,0.154048617114644,0.307007349452259,0.137836572484531,0.644521469209642,0.580066775656914,0.0852266274161009,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.589062011728432,0,0,0,0.975267478179181,0,0,0.272999822815972,0.565621727814851,0,0,0,0,0.578775534266688,2.62357900818653,0,0.30982349809975,0.281695602532241,0.430234056612155,0.196498082026242,0,0,2.74439925886963,1.31717957183961,0.379473173765715,0.699869440489966,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0.973865820823666,4.49275484981534,4.10822422259746,0,0,0.50787533340481,0.1605880751037,1.21079824314629,0,0,0,0,0.166849141711909,0,0,0,0,0.99921590399346,0,0,0.73254089635947,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0,0.219385397153973,0,0,0.923403102045565,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,1.01101699471016,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,1.27746588066972,0,0,0,1.83328339209347,0.717873024576814,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.425246896606173,0,0.0788057072991982,0.262272940674991,0,0,0,1.42939065274673,0.662091970365432,0,0.542999601753713,0,0,0,0,0,0,0,0,0.387848869084652,0.52893040697076,0,0,0.640724475406168,1.41483874589699,1.24271716604159,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0.983617892129413,0,0.886068179966986,0.244052529803926,0.500763722825999,0,0.554645257684261,0.248385611765534,0,0,1.81978941049977,0.285465333544967,0,0,0.144921028610825,0,0,0,0.3788060105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| ||
|short_description=p@chr17:79366155..79366168,+ | |short_description=p@chr17:79366155..79366168,+ | ||
}} | }} |
Latest revision as of 22:40, 25 July 2015
Short description: | p@chr17:79366155..79366168, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79366155..79366168, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 3.18e-12 | 9 |
carbohydrate secreting cell | 3.18e-12 | 9 |
central nervous system pericyte | 1.14e-09 | 2 |
fibrocyte | 2.40e-07 | 3 |
tendon cell | 2.40e-07 | 3 |
light melanocyte | 2.98e-07 | 3 |
extracellular matrix secreting cell | 3.17e-07 | 15 |
synovial cell | 4.05e-07 | 3 |
chondroblast | 4.67e-07 | 6 |
chondrocyte | 4.67e-07 | 6 |
stromal cell | 4.74e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
articulation | 3.07e-09 | 8 |
skeletal joint | 3.07e-09 | 8 |
articular system | 3.07e-09 | 8 |
dense regular connective tissue | 2.40e-07 | 3 |
tendon | 2.40e-07 | 3 |
regular connective tissue | 2.40e-07 | 3 |
stratified squamous epithelium | 4.05e-07 | 3 |
layer of synovial tissue | 4.05e-07 | 3 |
synovial joint | 4.05e-07 | 3 |
synovial membrane of synovial joint | 4.05e-07 | 3 |