FFCP PHASE1:Hg19::chr18:13542347..13542358,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:13542347..13542358,+ | |||
|description=CAGE_peak_at_chr18:13542347..13542358,+ | |||
|id=chr18:13542347..13542358,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.97e-07!12;CL:0000417!1.97e-07!12;CL:0000668!1.97e-07!12;CL:0000414!1.97e-07!12;CL:0000412!1.97e-07!12;CL:0000182!1.97e-07!12;CL:0000167!5.43e-07!1;CL:0000164!5.43e-07!1;CL:0000502!5.43e-07!1;CL:0000172!5.43e-07!1;CL:0000173!5.43e-07!1;CL:0002351!5.43e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000167;3.64e-29;1!CL:0000164;3.64e-29;1!CL:0000502;3.64e-29;1!CL:0000172;3.64e-29;1!CL:0000173;3.64e-29;1!CL:0002327;2.03e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.16e-29,1;CL:0000164,3.16e-29,1;CL:0000502,3.16e-29,1;CL:0000172,3.16e-29,1;CL:0000173,3.16e-29,1;CL:0002351,3.16e-29,1;CL:0002327,2.11e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.54e-29;1!CL:0002351;3.64e-29;1 | |||
|ontology_enrichment_disease=DOID:5093!1.96e-13!4;DOID:1612!1.96e-13!4;DOID:4430!5.43e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:5093;6.88e-64;4!DOID:1612;6.88e-64;4!DOID:4430;3.64e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,9.51e-64,4;DOID:1612,9.51e-64,4;DOID:4430,3.16e-29,1;DOID:7,3.11e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000059!5.34e-08!11;UBERON:0002107!6.72e-07!19;UBERON:0006925!6.72e-07!19;UBERON:0008836!6.72e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;3.76e-26;10!UBERON:0001443;7.43e-24;11!UBERON:0001911;2.03e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,4.28e-26,10;UBERON:0001443,8.35e-24,11;UBERON:0001911,2.11e-08,4;UBERON:0005333,2.11e-08,4;UBERON:0008425,2.11e-08,4;UBERON:0005311,2.11e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9313088667105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,2.86470537193757,2.53633999988968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.551482276150566,0.247247575143499,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0.314108192500469,0,0,0,0,0,0,2.90532133366085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.354809480650555,0,0,0,0,0,0,0.39246546425257,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59160620129095,0,0,0,0,0,0.437119121007915,0.940634592723046,0,1.88541237681301,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr18:13542347..13542358,+ | |||
}} |
Latest revision as of 23:46, 25 July 2015
Short description: | p@chr18:13542347..13542358, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:13542347..13542358, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.16e-29 | 1 |
enteroendocrine cell | 3.16e-29 | 1 |
type D enteroendocrine cell | 3.16e-29 | 1 |
somatostatin secreting cell | 3.16e-29 | 1 |
pancreatic D cell | 3.16e-29 | 1 |
progenitor cell of endocrine pancreas | 3.16e-29 | 1 |
mammary gland epithelial cell | 2.11e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
breast | 4.28e-26 | 10 |
chest | 8.35e-24 | 11 |
mammary gland | 2.11e-08 | 4 |
mammary bud | 2.11e-08 | 4 |
mammary ridge | 2.11e-08 | 4 |
mammary placode | 2.11e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 9.51e-64 | 4 |
breast cancer | 9.51e-64 | 4 |
somatostatinoma | 3.16e-29 | 1 |
disease of anatomical entity | 3.11e-07 | 39 |