FFCP PHASE1:Hg19::chr18:20494048..20494055,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:20494048..20494055,+ | |||
|coexpression_cluster_id=C1796 | |||
|description=CAGE_peak_at_chr18:20494048..20494055,+ | |description=CAGE_peak_at_chr18:20494048..20494055,+ | ||
|id=chr18:20494048..20494055,+ | |id=chr18:20494048..20494055,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.14e-18!43;CL:0000066!1.38e-12!254;CL:0000223!3.15e-12!59;CL:0002159!5.18e-10!13;CL:0002166!6.63e-10!3;CL:0002368!9.02e-10!13;CL:0002251!2.70e-09!21;CL:0002621!3.78e-09!3;CL:0002231!6.88e-09!3;CL:0002327!3.23e-07!4 | |ontology_enrichment_celltype=CL:0002076!1.14e-18!43;CL:0000066!1.38e-12!254;CL:0000223!3.15e-12!59;CL:0002159!5.18e-10!13;CL:0002166!6.63e-10!3;CL:0002368!9.02e-10!13;CL:0002251!2.70e-09!21;CL:0002621!3.78e-09!3;CL:0002231!6.88e-09!3;CL:0002327!3.23e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002166;5.31e-32;3!CL:0002336;2.62e-12;1!CL:0002261;2.62e-12;1!CL:0002170;2.62e-12;1!CL:0002159;3.01e-12;14!CL:0002327;1.81e-11;4!CL:0002076;1.22e-08;42!CL:0000240;4.41e-08;6!CL:0000311;4.41e-08;6!CL:0000079;4.41e-08;6!CL:0000237;4.41e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.75e-32,3;CL:0002159,2.61e-12,14;CL:0002336,2.63e-12,1;CL:0002261,2.63e-12,1;CL:0002170,2.63e-12,1;CL:0002327,1.19e-11,4;CL:0002076,1.12e-08,42;CL:0000240,5.36e-08,6;CL:0000311,5.36e-08,6;CL:0000079,5.36e-08,6;CL:0000237,5.36e-08,6;CL:0000036,5.36e-08,6;CL:0000357,5.36e-08,6;CL:0000114,5.36e-08,6;CL:0000066,3.81e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0005754;7.33e-12;1!CL:0000357;4.41e-08;6!CL:0000114;4.41e-08;6 | |||
|ontology_enrichment_disease=DOID:1749!2.51e-14!14 | |ontology_enrichment_disease=DOID:1749!2.51e-14!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.59e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.80e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.64e-11!169;UBERON:0000925!4.64e-11!169;UBERON:0006595!4.64e-11!169;UBERON:0001004!7.39e-10!72;UBERON:0006947!3.03e-09!3;UBERON:0004054!3.03e-09!3;UBERON:0001949!3.78e-09!3;UBERON:0001007!2.54e-08!155;UBERON:0001555!2.54e-08!155;UBERON:0007026!2.54e-08!155;UBERON:0001708!1.69e-07!4;UBERON:0001704!1.69e-07!4;UBERON:0001911!3.23e-07!4;UBERON:0005333!3.23e-07!4;UBERON:0008425!3.23e-07!4;UBERON:0005311!3.23e-07!4;UBERON:0000161!4.61e-07!35;UBERON:0005904!5.18e-07!4;UBERON:0005911!5.23e-07!82;UBERON:0005153!9.75e-07!37 | |ontology_enrichment_uberon=UBERON:0004119!4.64e-11!169;UBERON:0000925!4.64e-11!169;UBERON:0006595!4.64e-11!169;UBERON:0001004!7.39e-10!72;UBERON:0006947!3.03e-09!3;UBERON:0004054!3.03e-09!3;UBERON:0001949!3.78e-09!3;UBERON:0001007!2.54e-08!155;UBERON:0001555!2.54e-08!155;UBERON:0007026!2.54e-08!155;UBERON:0001708!1.69e-07!4;UBERON:0001704!1.69e-07!4;UBERON:0001911!3.23e-07!4;UBERON:0005333!3.23e-07!4;UBERON:0008425!3.23e-07!4;UBERON:0005311!3.23e-07!4;UBERON:0000161!4.61e-07!35;UBERON:0005904!5.18e-07!4;UBERON:0005911!5.23e-07!82;UBERON:0005153!9.75e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;3.47e-24;4!UBERON:0008895;3.47e-24;4!UBERON:0011159;1.74e-19;5!UBERON:0006947;5.66e-15;3!UBERON:0004054;5.66e-15;3!UBERON:0001000;7.33e-12;1!UBERON:0000998;7.33e-12;1!UBERON:0006868;7.33e-12;1!UBERON:0005352;7.33e-12;1!UBERON:0001911;1.81e-11;4!UBERON:0005904;1.81e-11;4!UBERON:0011137;3.57e-09;11!UBERON:0010323;3.57e-09;11!UBERON:0003729;6.16e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,1.51e-24,4;UBERON:0008895,1.51e-24,4;UBERON:0011159,8.97e-20,5;UBERON:0010188,1.38e-16,6;UBERON:0002539,1.38e-16,6;UBERON:0008816,1.38e-16,6;UBERON:0006947,1.23e-14,3;UBERON:0004054,1.23e-14,3;UBERON:0000998,1.19e-11,1;UBERON:0006868,1.19e-11,1;UBERON:0001911,1.19e-11,4;UBERON:0005333,1.19e-11,4;UBERON:0008425,1.19e-11,4;UBERON:0005311,1.19e-11,4;UBERON:0001000,1.47e-11,1;UBERON:0005352,1.47e-11,1;UBERON:0005904,3.24e-11,4;UBERON:0010323,2.66e-09,11;UBERON:0003729,6.03e-08,13;UBERON:0011137,2.06e-07,14 | |||
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| ||
|short_description=p@chr18:20494048..20494055,+ | |short_description=p@chr18:20494048..20494055,+ | ||
}} | }} |
Latest revision as of 23:55, 25 July 2015
Short description: | p@chr18:20494048..20494055, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:20494048..20494055, + |
Coexpression cluster: | C1796_Keratinocyte_Small_Mallassezderived_cervical_Mammary_oral_malignant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.75e-32 | 3 |
general ecto-epithelial cell | 2.61e-12 | 14 |
buccal mucosa cell | 2.63e-12 | 1 |
endothelial cell of viscerocranial mucosa | 2.63e-12 | 1 |
keratinized cell of the oral mucosa | 2.63e-12 | 1 |
mammary gland epithelial cell | 1.19e-11 | 4 |
endo-epithelial cell | 1.12e-08 | 42 |
stratified squamous epithelial cell | 5.36e-08 | 6 |
keratin accumulating cell | 5.36e-08 | 6 |
stratified epithelial cell | 5.36e-08 | 6 |
keratinizing barrier epithelial cell | 5.36e-08 | 6 |
epithelial fate stem cell | 5.36e-08 | 6 |
stratified epithelial stem cell | 5.36e-08 | 6 |
surface ectodermal cell | 5.36e-08 | 6 |
epithelial cell | 3.81e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 1.51e-24 | 4 |
splanchnocranium | 1.51e-24 | 4 |
primary subdivision of cranial skeletal system | 8.97e-20 | 5 |
protuberance | 1.38e-16 | 6 |
pharyngeal arch | 1.38e-16 | 6 |
embryonic head | 1.38e-16 | 6 |
male genital duct | 1.23e-14 | 3 |
internal male genitalia | 1.23e-14 | 3 |
seminal vesicle | 1.19e-11 | 1 |
seminal fluid secreting gland | 1.19e-11 | 1 |
mammary gland | 1.19e-11 | 4 |
mammary bud | 1.19e-11 | 4 |
mammary ridge | 1.19e-11 | 4 |
mammary placode | 1.19e-11 | 4 |
vas deferens | 1.47e-11 | 1 |
spermatic cord | 1.47e-11 | 1 |
duct of male reproductive system | 3.24e-11 | 4 |
cranial skeletal system | 2.66e-09 | 11 |
mouth mucosa | 6.03e-08 | 13 |
axial skeletal system | 2.06e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.80e-07 | 14 |