FFCP PHASE1:Hg19::chr18:76758032..76758040,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:76758032..76758040,+ | |||
|description=CAGE_peak_at_chr18:76758032..76758040,+ | |||
|id=chr18:76758032..76758040,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.01e-13!5;CL:0000128!9.22e-12!7;CL:0000126!9.22e-12!7;CL:0000127!9.22e-12!7;CL:0002453!9.22e-12!7;CL:0000148!7.71e-09!10;CL:0000541!7.71e-09!10;CL:0002605!2.62e-08!3;CL:0000133!1.26e-07!59;CL:0002319!2.63e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.31e-26;5!CL:0000148;5.58e-23;10!CL:0000540;4.35e-22;6!CL:0000404;4.35e-22;6!CL:0000147;1.59e-16;14!CL:0000710;1.16e-11;20!CL:0002321;3.69e-09;15!CL:0000039;4.13e-09;7!CL:0000586;4.13e-09;7!CL:0002319;9.70e-09;25!CL:0000075;1.05e-08;27!CL:0000062;3.44e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.56e-26,5;CL:0000148,5.58e-23,10;CL:0000541,5.58e-23,10;CL:0000540,3.04e-22,6;CL:0000031,3.04e-22,6;CL:0000404,3.04e-22,6;CL:0000047,7.42e-17,8;CL:0000147,1.60e-16,14;CL:0000133,3.01e-14,59;CL:0000710,1.16e-11,20;CL:0000221,1.27e-11,72;CL:0000039,5.16e-09,7;CL:0000586,5.16e-09,7;CL:0002319,9.13e-09,25;CL:0000075,1.05e-08,27;CL:0000333,3.19e-08,41;CL:0002077,5.91e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000031;4.35e-22;6!CL:0000133;2.49e-09;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.75e-41!57;UBERON:0005068!5.75e-41!57;UBERON:0006241!5.75e-41!57;UBERON:0007135!5.75e-41!57;UBERON:0001017!2.78e-39!82;UBERON:0005743!5.96e-37!86;UBERON:0000073!3.05e-34!94;UBERON:0001016!3.05e-34!94;UBERON:0002616!4.72e-34!59;UBERON:0002020!2.64e-33!34;UBERON:0003528!2.64e-33!34;UBERON:0001893!1.55e-32!34;UBERON:0002780!2.07e-31!41;UBERON:0001890!2.07e-31!41;UBERON:0006240!2.07e-31!41;UBERON:0003075!2.38e-31!86;UBERON:0007284!2.38e-31!86;UBERON:0000955!4.25e-31!69;UBERON:0006238!4.25e-31!69;UBERON:0002791!6.49e-31!33;UBERON:0003080!1.66e-30!42;UBERON:0002346!1.74e-29!90;UBERON:0001869!5.88e-29!32;UBERON:0000956!3.26e-22!25;UBERON:0000203!3.26e-22!25;UBERON:0007023!3.26e-19!115;UBERON:0003056!6.71e-19!61;UBERON:0004121!2.00e-18!169;UBERON:0000924!1.00e-17!173;UBERON:0006601!1.00e-17!173;UBERON:0002619!9.98e-17!22;UBERON:0000033!1.48e-13!123;UBERON:0001950!2.90e-13!20;UBERON:0002308!8.74e-13!9;UBERON:0000125!8.74e-13!9;UBERON:0000153!1.58e-12!129;UBERON:0007811!1.58e-12!129;UBERON:0003076!2.39e-11!15;UBERON:0003057!2.39e-11!15;UBERON:0000025!1.85e-10!194;UBERON:0002298!2.53e-10!8;UBERON:0002420!3.71e-09!9;UBERON:0007245!3.71e-09!9;UBERON:0010009!3.71e-09!9;UBERON:0010011!3.71e-09!9;UBERON:0000454!3.71e-09!9;UBERON:0004111!9.08e-09!241;UBERON:0009663!1.29e-08!7;UBERON:0004733!1.30e-08!12;UBERON:0002028!1.30e-08!12;UBERON:0007277!1.30e-08!12;UBERON:0006331!1.67e-08!3;UBERON:0003978!1.85e-08!3;UBERON:0009751!1.85e-08!3;UBERON:0000946!1.85e-08!3;UBERON:0002523!1.85e-08!3;UBERON:0005983!1.85e-08!3;UBERON:0002165!1.85e-08!3;UBERON:0002062!1.85e-08!3;UBERON:0007280!1.85e-08!3;UBERON:0000988!2.49e-08!3;UBERON:0000349!4.61e-08!5;UBERON:0004732!7.19e-08!13;UBERON:0001871!2.97e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;8.02e-16;1!UBERON:0005208;8.02e-16;1!UBERON:0004145;8.02e-16;1!UBERON:0005946;8.02e-16;1!UBERON:0005965;8.02e-16;1!UBERON:0002078;8.02e-16;1!UBERON:0002081;1.44e-08;2!UBERON:0002133;1.44e-08;2!UBERON:0000473;4.42e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,7.46e-16,1;UBERON:0005208,7.46e-16,1;UBERON:0005946,7.46e-16,1;UBERON:0005965,7.46e-16,1;UBERON:0002078,7.46e-16,1;UBERON:0002081,1.39e-08,2;UBERON:0002133,1.39e-08,2;UBERON:0010227,1.39e-08,2;UBERON:0000473,5.37e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,1.14494394852423,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.927708378250397,1.62671520017326,1.55491582523056,3.02785021050754,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55668090191184,1.56768049849117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0,0.067401132980677,0,0.937057782901357,0,0,0,0,0,0.61214552326098,0,0,0.414752765588989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,2.15361907373044,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,2.25054407851027,1.65047323916681,2.07720169014593,0,0,0.121499113316049,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.271878931907327,0.394636641377094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0.594092800654172,0.8453114551668,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.203974470572744,0,0,0,0,0,0,0.109265571963696,0,0.407955318967927,1.06886962106224,2.02168778976659,0,0,0.267964130156178,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:76758032..76758040,+ | |||
}} |
Latest revision as of 02:28, 26 July 2015
Short description: | p@chr18:76758032..76758040, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:76758032..76758040, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.56e-26 | 5 |
melanocyte | 5.58e-23 | 10 |
melanoblast | 5.58e-23 | 10 |
neuron | 3.04e-22 | 6 |
neuroblast | 3.04e-22 | 6 |
electrically signaling cell | 3.04e-22 | 6 |
neuronal stem cell | 7.42e-17 | 8 |
pigment cell | 1.60e-16 | 14 |
neurectodermal cell | 3.01e-14 | 59 |
neurecto-epithelial cell | 1.16e-11 | 20 |
ectodermal cell | 1.27e-11 | 72 |
germ line cell | 5.16e-09 | 7 |
germ cell | 5.16e-09 | 7 |
neural cell | 9.13e-09 | 25 |
columnar/cuboidal epithelial cell | 1.05e-08 | 27 |
migratory neural crest cell | 3.19e-08 | 41 |
ecto-epithelial cell | 5.91e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 7.46e-16 | 1 |
right atrium valve | 7.46e-16 | 1 |
outflow tract of atrium | 7.46e-16 | 1 |
outflow part of right atrium | 7.46e-16 | 1 |
right cardiac atrium | 7.46e-16 | 1 |
cardiac atrium | 1.39e-08 | 2 |
atrioventricular valve | 1.39e-08 | 2 |
future cardiac atrium | 1.39e-08 | 2 |
testis | 5.37e-08 | 8 |