FFCP PHASE1:Hg19::chr19:16023475..16023478,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:16023475..16023478,- | |||
|coexpression_cluster_id=C326 | |||
|description=CAGE_peak_at_chr19:16023475..16023478,- | |||
|id=chr19:16023475..16023478,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000082;5.83e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,5.73e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.04e-10;30 | |||
|ontology_enrichment_disease=DOID:4929!1.05e-09!2;DOID:305!3.33e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:1324;7.92e-10;15!DOID:0050615;2.83e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,7.75e-10,15;DOID:0050615,2.77e-09,16 | |||
|ontology_enrichment_uberon=UBERON:0009497!7.95e-10!25;UBERON:0000015!7.95e-10!25;UBERON:0002423!7.95e-10!25;UBERON:0006235!7.95e-10!25;UBERON:0004161!7.95e-10!25;UBERON:0001897!1.10e-09!2;UBERON:0008835!9.92e-09!22;UBERON:0003894!9.92e-09!22;UBERON:0009854!2.61e-08!23;UBERON:0007499!1.44e-07!25;UBERON:0009856!3.06e-07!26;UBERON:0001017!6.18e-07!82;UBERON:0001049!9.16e-07!57;UBERON:0005068!9.16e-07!57;UBERON:0006241!9.16e-07!57;UBERON:0007135!9.16e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;1.12e-09;4!UBERON:0003928;1.12e-09;4!UBERON:0004802;5.83e-08;19!UBERON:0000115;5.83e-08;19!UBERON:0002048;5.32e-07;22!UBERON:0004807;5.32e-07;22!UBERON:0000117;5.32e-07;22!UBERON:0000171;5.32e-07;22!UBERON:0000170;5.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,5.73e-08,19;UBERON:0000115,5.73e-08,19;UBERON:0008835,4.94e-07,22;UBERON:0003894,4.94e-07,22;UBERON:0005911,5.11e-07,82;UBERON:0002048,5.24e-07,22;UBERON:0000117,5.24e-07,22;UBERON:0000171,5.24e-07,22;UBERON:0000170,5.24e-07,22;UBERON:0005597,5.24e-07,22;UBERON:0000118,5.24e-07,22;UBERON:0002394,7.17e-07,6;UBERON:0003928,7.17e-07,6;UBERON:0009854,9.13e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.847294206991012,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29650819221462,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0.258565912723101,0,2.39521573038061,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981477185010256,0.471878893390961,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.447421727191169,0,0.365753774946808,0,0,0,0,0,0,0,0.11294608203896,0,0,0.154348316215889,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr19:16023475..16023478,- | |||
}} |
Latest revision as of 04:38, 26 July 2015
Short description: | p@chr19:16023475..16023478, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:16023475..16023478, - |
Coexpression cluster: | C326_bile_choriocarcinoma_giant_lung_mucinous_glassy_malignant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 5.73e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 5.73e-08 | 19 |
lung epithelium | 5.73e-08 | 19 |
hepatic diverticulum | 4.94e-07 | 22 |
liver primordium | 4.94e-07 | 22 |
endo-epithelium | 5.11e-07 | 82 |
lung | 5.24e-07 | 22 |
respiratory tube | 5.24e-07 | 22 |
respiration organ | 5.24e-07 | 22 |
pair of lungs | 5.24e-07 | 22 |
lung primordium | 5.24e-07 | 22 |
lung bud | 5.24e-07 | 22 |
bile duct | 7.17e-07 | 6 |
digestive system duct | 7.17e-07 | 6 |
digestive tract diverticulum | 9.13e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 7.75e-10 | 15 |
respiratory system cancer | 2.77e-09 | 16 |