FFCP PHASE1:Hg19::chr19:2267604..2267606,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:2267604..2267606,- | |||
|description=CAGE_peak_at_chr19:2267604..2267606,- | |description=CAGE_peak_at_chr19:2267604..2267606,- | ||
|id=chr19:2267604..2267606,- | |id=chr19:2267604..2267606,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000307;1.85e-12;3!CL:0000333;6.55e-08;5!CL:0002569;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.85e-12,3;CL:0000069,1.85e-12,3;CL:0000307,1.85e-12,3;CL:0000377,1.85e-12,3;CL:0002569,8.02e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000377;1.85e-12;3 | |||
|ontology_enrichment_disease=DOID:162!1.16e-07!235;DOID:14566!2.75e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3193;9.07e-18;2!DOID:962;9.07e-18;2!DOID:1192;2.59e-12;3!DOID:1115;1.38e-07;20!DOID:169;8.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,1.07e-17,2;DOID:962,1.07e-17,2;DOID:1192,2.89e-12,3;DOID:1115,1.33e-07,20;DOID:169,8.97e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;9.07e-18;2!UBERON:0000013;6.55e-08;5!UBERON:0002410;6.55e-08;5!UBERON:0003422;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,1.07e-17,2;UBERON:0000013,7.01e-08,5;UBERON:0002410,7.01e-08,5;UBERON:0003422,8.02e-07,6 | |||
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| ||
|short_description=p@chr19:2267604..2267606,- | |short_description=p@chr19:2267604..2267606,- | ||
}} | }} |
Latest revision as of 05:47, 26 July 2015
Short description: | p@chr19:2267604..2267606, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:2267604..2267606, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.85e-12 | 3 |
branched duct epithelial cell | 1.85e-12 | 3 |
tracheal epithelial cell | 1.85e-12 | 3 |
tracheoblast | 1.85e-12 | 3 |
mesenchymal stem cell of umbilical cord | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 1.07e-17 | 2 |
sympathetic nervous system | 7.01e-08 | 5 |
autonomic nervous system | 7.01e-08 | 5 |
mesenchyme of umbilical cord | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 1.07e-17 | 2 |
neurofibroma | 1.07e-17 | 2 |
peripheral nervous system neoplasm | 2.89e-12 | 3 |
sarcoma | 1.33e-07 | 20 |
neuroendocrine tumor | 8.97e-07 | 6 |