FFCP PHASE1:Hg19::chr19:24185682..24185711,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:24185682..24185711,-
|short_description=p@chr19:24185682..24185711,-
|description=CAGE_peak_at_chr19:24185682..24185711,-
|association_with_transcript=NA
...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:24185682..24185711,- | |||
|description=CAGE_peak_at_chr19:24185682..24185711,- | |||
|id=chr19:24185682..24185711,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.89e-08;4!UBERON:0007284;5.89e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.03e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,9.90e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.77e-29!115;UBERON:0001049!6.42e-11!57;UBERON:0005068!6.42e-11!57;UBERON:0006241!6.42e-11!57;UBERON:0007135!6.42e-11!57;UBERON:0003075!9.30e-10!86;UBERON:0007284!9.30e-10!86;UBERON:0003080!1.47e-09!42;UBERON:0002346!4.70e-09!90;UBERON:0002020!4.83e-09!34;UBERON:0003528!4.83e-09!34;UBERON:0002780!5.71e-09!41;UBERON:0001890!5.71e-09!41;UBERON:0006240!5.71e-09!41;UBERON:0002616!5.94e-09!59;UBERON:0003056!1.26e-07!61;UBERON:0001893!1.33e-07!34;UBERON:0001869!1.51e-07!32;UBERON:0002791!1.64e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.72e-10;3!UBERON:0000946;1.72e-10;3!UBERON:0002133;5.74e-08;2!UBERON:0005090;1.26e-07;2!UBERON:0001630;1.26e-07;2!UBERON:0002784;2.53e-07;4!UBERON:0001897;9.57e-07;2!UBERON:0010225;9.57e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.07e-13,114;UBERON:0003978,1.04e-10,3;UBERON:0009751,1.04e-10,3;UBERON:0000946,1.04e-10,3;UBERON:0002523,1.04e-10,3;UBERON:0005983,1.04e-10,3;UBERON:0002165,1.04e-10,3;UBERON:0002062,1.04e-10,3;UBERON:0007280,1.04e-10,3;UBERON:0002133,5.68e-08,2;UBERON:0005090,1.20e-07,2;UBERON:0001630,1.20e-07,2;UBERON:0004797,1.87e-07,7;UBERON:0002784,2.72e-07,4;UBERON:0001897,9.61e-07,2;UBERON:0010225,9.61e-07,2 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0.164201178899891,0.0787107813136792,0,0,2.01260960310899,0,0.30120591877825,0,0.0774672005803016,0,0,0,0.200544447470142,0.434021741431704,0.447830948479849,0,0,0,0,0,0.697287110717054,0,0,0.575384784644301,1.0246428261164,0,1.37898272294647,0.645484683583826,1.35426486594342,0.376484679085209,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,3.02699751316684,0,0,0,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0.196709770113833,1.57204305099666,0,0,0,0,5.84480185223734,0,0,0,0,0,0,0,0,0,0,0.267540828089713,2.09071047609954,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,9.75227465255847,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.327447688744282,0,0.370784442784429,0.649094787309367,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0.673588117878509,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0,0,1.06400514659507,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0.269662616320329,0.392442930250692,0,0.738155454624648,0,0,0,1.26755034821831,1.96565443335525,0,0,0,0.171567810298526,0.219500570817251,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0.462985512576611,0,0.790204397959275,0.858486162094873,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0.088048434013226,1.4512968087854,1.29707958075265,2.14612136824846,0.126995788584338,0.763976851116555,0,5.13217338068116,0,0.300343057843917,0,0,0,0,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,4.21667878966063,0.239624855491583,0,0,0.723906533337896,0.61642896765115,0,0,0,0,0.256686072559497,0.254094624222463,0,0,0,0.637938751653163,0.749007023947182,2.99161459204025,0.828831026872071,0,1.00034104211935,0.271265023699736,0,0,0,0.35142424497814,0,0,1.03473071292505,0,0.553107505625109,0,0,0.343143423810856,0.206768026122887,0,0.320182673410333,0,6.65741758041988,0.604780586659361,0,0,0,0.384417447767103,0,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,0.241718899183244,0.200506470303285,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.721287081534056,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0.4046311234222,0,0,0.6970372701606,0.308033580176089,0,0.869932992075073,0.18532421910392,0,0,0,0,0.255897791311334,0.855877976067841,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0.670302275535787,0,0.470719003883896,0,0,0,0,0,0,0.569647187174163,0.238231775457789,1.23408681925858,0,0.540031437238115,3.17250070517708,0.106824071127473,2.88743956579008,0.245040215981032,0,0,0,0,0,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,2.46174797895425,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0.71623345421307,2.07875276582847,0.307160702099232,0.994147647766298,1.96937182974718,0,0,0,1.39473591775749,0.828851746593443,0,0,0.123084805461069,0,0,0.179021174675609,0,0.789147245095469,0,1.11136990144637,0,0,0,0,0,2.17499872630438,0.1137934482855,0,0,0,0,0,0.885741385813839,0.844175070377856,0,0.552896299656123,0,0,0,0,0.923403102045565,0,0,0.0897576444097721,0,0.957003479195758,0.0915975934018623,1.5991043280559,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,0.611030144933625,0,0,0,0,2.40773294189637,0,0,0.19566461893209,0,0.789168805698781,0,0,0.126373159256976,0,0.103688191397247,0.664653872707185,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0.698906672968121,0,0.0967563312890851,0.146178634172371,0,0.581934098930517,0,0.225980740780532,0,0,0.316553979779393,0,0.0801588202515337,0.426905989478705,0.19980960958213,0,0,0.171594997861965,0.14405479798815,0,1.17847017308398,0,0,0,0,0.600420288709789,1.50595916781192,0,0,0,6.7027776305341,1.83328339209347,7.17873024576814,0.199679000498991,0.858452096273142,0.669514372325618,0.268733889946905,0,3.49487848582361,0,0.247247575143499,0,0,0,0.795229689809303,2.45166131000836,0,0,0.415440338029185,0.2249738915515,0,0.121499113316049,0,0.788057072991982,0.104909176269996,0,0.179287339332845,0.383830394638891,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0,1.17241786942466,1.32506888912221,1.80996138906171,0.66116300871345,0.171086837884329,0,1.81538601365081,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.610131324509816,1.752673029891,1.14681839138014,0.998361463831671,0.310482014706917,0,0.124980407962107,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0.318593534327405,0.449803112163605,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0,0,0.363697318405119,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.617602894321944,0,0,0,0,0,0,0,1.10606748921385,0,0.265729680626726,0,0.327609848846413,0.245772908753719,0,0,0.106691729694141,0,0.567515953566836,0,0,9.95323616052756,0.127894371303652,0.107824811396682,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.128458450192919,0,2.23487402680012,0.205116364240755,0,0.138314504928436,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0.526472298444801,0.40341013740704,0.781514011233092,0.261906694481422,0,0,0.135075169236789,0.781078098613847,0.413373593002368,0.0634158101939068,0,0,6.45074531906083,0,0,2.14280734351315,0.336283722218824,0,0.455324382702595,0.177404740325278,0.115233987555779,0,0.0679697329768317,0.394636641377094,0,0,0.313972371402056,0.785577949580009,0.280272163313789,4.56579360254748,0,0.47775168788705,0.142953088353313,0,0.116241425368125,0.173858272302579,2.40513409419076,0,0.51215543128185,2.07377898544228,0,0.118332000730565,0,1.27016115057279,0,0,0,0,0,0,5.17943069750316,0,0,0.971421986118279,0,0,0,0,0.109940516745429,0,1.77500563648273,0.437119121007915,0.470317296361523,0.245148321753905,0,1.76677620403451,0,0.4226557275834,0,1.2217909337381,0.193373663920732,0.199882311849858,0.178553938605658,0,0,2.92134555298607,0.458729283404541,1.29005624836306,0,0.475940431336403,0,1.0580536810308,0.371995018166751,0.462175628631418,0,0,0.109265571963696,0.253397002022874,0.101988829741982,0.26721740526556,0.275684698604535,0,0.682008283964155,0.267964130156178,1.65833887891756,1.13776295448085,0.426467963801962,0,0.0645889098360061,0.248298857183432,0.112131862580613,0.509177266225319,0.202117188958219,0.217716747896961,0,0.134704106029175,0.860666464712116,0,0.244209805832924,0,7.7228912914776,0,0,0,0,5.99181096766961,0.201273793591026,0 | |phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0.164201178899891,0.0787107813136792,0,0,2.01260960310899,0,0.30120591877825,0,0.0774672005803016,0,0,0,0.200544447470142,0.434021741431704,0.447830948479849,0,0,0,0,0,0.697287110717054,0,0,0.575384784644301,1.0246428261164,0,1.37898272294647,0.645484683583826,1.35426486594342,0.376484679085209,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,3.02699751316684,0,0,0,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0.196709770113833,1.57204305099666,0,0,0,0,5.84480185223734,0,0,0,0,0,0,0,0,0,0,0.267540828089713,2.09071047609954,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,9.75227465255847,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.327447688744282,0,0.370784442784429,0.649094787309367,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0.673588117878509,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0,0,1.06400514659507,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0.269662616320329,0.392442930250692,0,0.738155454624648,0,0,0,1.26755034821831,1.96565443335525,0,0,0,0.171567810298526,0.219500570817251,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0.462985512576611,0,0.790204397959275,0.858486162094873,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0.088048434013226,1.4512968087854,1.29707958075265,2.14612136824846,0.126995788584338,0.763976851116555,0,5.13217338068116,0,0.300343057843917,0,0,0,0,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,4.21667878966063,0.239624855491583,0,0,0.723906533337896,0.61642896765115,0,0,0,0,0.256686072559497,0.254094624222463,0,0,0,0.637938751653163,0.749007023947182,2.99161459204025,0.828831026872071,0,1.00034104211935,0.271265023699736,0,0,0,0.35142424497814,0,0,1.03473071292505,0,0.553107505625109,0,0,0.343143423810856,0.206768026122887,0,0.320182673410333,0,6.65741758041988,0.604780586659361,0,0,0,0.384417447767103,0,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,0.241718899183244,0.200506470303285,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.721287081534056,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0.4046311234222,0,0,0.6970372701606,0.308033580176089,0,0.869932992075073,0.18532421910392,0,0,0,0,0.255897791311334,0.855877976067841,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0.670302275535787,0,0.470719003883896,0,0,0,0,0,0,0.569647187174163,0.238231775457789,1.23408681925858,0,0.540031437238115,3.17250070517708,0.106824071127473,2.88743956579008,0.245040215981032,0,0,0,0,0,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,2.46174797895425,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0.71623345421307,2.07875276582847,0.307160702099232,0.994147647766298,1.96937182974718,0,0,0,1.39473591775749,0.828851746593443,0,0,0.123084805461069,0,0,0.179021174675609,0,0.789147245095469,0,1.11136990144637,0,0,0,0,0,2.17499872630438,0.1137934482855,0,0,0,0,0,0.885741385813839,0.844175070377856,0,0.552896299656123,0,0,0,0,0.923403102045565,0,0,0.0897576444097721,0,0.957003479195758,0.0915975934018623,1.5991043280559,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,0.611030144933625,0,0,0,0,2.40773294189637,0,0,0.19566461893209,0,0.789168805698781,0,0,0.126373159256976,0,0.103688191397247,0.664653872707185,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0.698906672968121,0,0.0967563312890851,0.146178634172371,0,0.581934098930517,0,0.225980740780532,0,0,0.316553979779393,0,0.0801588202515337,0.426905989478705,0.19980960958213,0,0,0.171594997861965,0.14405479798815,0,1.17847017308398,0,0,0,0,0.600420288709789,1.50595916781192,0,0,0,6.7027776305341,1.83328339209347,7.17873024576814,0.199679000498991,0.858452096273142,0.669514372325618,0.268733889946905,0,3.49487848582361,0,0.247247575143499,0,0,0,0.795229689809303,2.45166131000836,0,0,0.415440338029185,0.2249738915515,0,0.121499113316049,0,0.788057072991982,0.104909176269996,0,0.179287339332845,0.383830394638891,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0,1.17241786942466,1.32506888912221,1.80996138906171,0.66116300871345,0.171086837884329,0,1.81538601365081,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.610131324509816,1.752673029891,1.14681839138014,0.998361463831671,0.310482014706917,0,0.124980407962107,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0.318593534327405,0.449803112163605,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0,0,0.363697318405119,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.617602894321944,0,0,0,0,0,0,0,1.10606748921385,0,0.265729680626726,0,0.327609848846413,0.245772908753719,0,0,0.106691729694141,0,0.567515953566836,0,0,9.95323616052756,0.127894371303652,0.107824811396682,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.128458450192919,0,2.23487402680012,0.205116364240755,0,0.138314504928436,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0.526472298444801,0.40341013740704,0.781514011233092,0.261906694481422,0,0,0.135075169236789,0.781078098613847,0.413373593002368,0.0634158101939068,0,0,6.45074531906083,0,0,2.14280734351315,0.336283722218824,0,0.455324382702595,0.177404740325278,0.115233987555779,0,0.0679697329768317,0.394636641377094,0,0,0.313972371402056,0.785577949580009,0.280272163313789,4.56579360254748,0,0.47775168788705,0.142953088353313,0,0.116241425368125,0.173858272302579,2.40513409419076,0,0.51215543128185,2.07377898544228,0,0.118332000730565,0,1.27016115057279,0,0,0,0,0,0,5.17943069750316,0,0,0.971421986118279,0,0,0,0,0.109940516745429,0,1.77500563648273,0.437119121007915,0.470317296361523,0.245148321753905,0,1.76677620403451,0,0.4226557275834,0,1.2217909337381,0.193373663920732,0.199882311849858,0.178553938605658,0,0,2.92134555298607,0.458729283404541,1.29005624836306,0,0.475940431336403,0,1.0580536810308,0.371995018166751,0.462175628631418,0,0,0.109265571963696,0.253397002022874,0.101988829741982,0.26721740526556,0.275684698604535,0,0.682008283964155,0.267964130156178,1.65833887891756,1.13776295448085,0.426467963801962,0,0.0645889098360061,0.248298857183432,0.112131862580613,0.509177266225319,0.202117188958219,0.217716747896961,0,0.134704106029175,0.860666464712116,0,0.244209805832924,0,7.7228912914776,0,0,0,0,5.99181096766961,0.201273793591026,0 | ||
|short_description=p@chr19:24185682..24185711,- | |||
}} | }} |
Latest revision as of 05:53, 26 July 2015
Short description: | p@chr19:24185682..24185711, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:24185682..24185711, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.07e-13 | 114 |
valve | 1.04e-10 | 3 |
cardiac mesenchyme | 1.04e-10 | 3 |
cardial valve | 1.04e-10 | 3 |
tunica intima | 1.04e-10 | 3 |
heart layer | 1.04e-10 | 3 |
endocardium | 1.04e-10 | 3 |
endocardial cushion | 1.04e-10 | 3 |
presumptive endocardium | 1.04e-10 | 3 |
atrioventricular valve | 5.68e-08 | 2 |
muscle structure | 1.20e-07 | 2 |
muscle organ | 1.20e-07 | 2 |
blood vessel layer | 1.87e-07 | 7 |
regional part of diencephalon | 2.72e-07 | 4 |
dorsal plus ventral thalamus | 9.61e-07 | 2 |
thalamic complex | 9.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 9.90e-08 | 2 |