FFCP PHASE1:Hg19::chr19:34664331..34664347,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:34664331..34664347,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr19:34664331..34664347,- | |description=CAGE_peak_at_chr19:34664331..34664347,- | ||
|id=chr19:34664331..34664347,- | |id=chr19:34664331..34664347,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.57e-30;12!CL:0002581;3.67e-23;1!CL:0002231;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.46e-30,12;CL:0002581,2.62e-23,1;CL:0000223,9.50e-10,58;CL:0002231,1.30e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.39e-19;11!UBERON:0009497;3.99e-16;13!CL:0000223;1.01e-07;58!UBERON:0001041;2.39e-07;30!UBERON:0003104;5.34e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.26e-08;3!DOID:127;1.26e-08;3!DOID:0060072;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.40e-08,3;DOID:127,1.40e-08,3;DOID:0060072,9.63e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.29e-19;19!UBERON:0006925;4.29e-19;19!UBERON:0002423;1.26e-14;25!UBERON:0005406;2.74e-12;2!UBERON:0002365;2.87e-11;31!UBERON:0002330;2.87e-11;31!UBERON:0002368;8.96e-11;33!UBERON:0000949;2.20e-08;43!UBERON:0002530;2.23e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.82e-19,19;UBERON:0006925,3.82e-19,19;UBERON:0008836,3.82e-19,19;UBERON:0008835,1.33e-16,22;UBERON:0003894,1.33e-16,22;UBERON:0009854,6.71e-16,23;UBERON:0007499,1.15e-14,25;UBERON:0009497,1.15e-14,25;UBERON:0000015,1.15e-14,25;UBERON:0002423,1.15e-14,25;UBERON:0006235,1.15e-14,25;UBERON:0004161,1.15e-14,25;UBERON:0009856,4.06e-14,26;UBERON:0005406,2.32e-12,2;UBERON:0002365,6.57e-12,31;UBERON:0002330,6.57e-12,31;UBERON:0002368,1.36e-10,35;UBERON:0003929,1.85e-10,54;UBERON:0002530,1.38e-09,59;UBERON:0000949,2.57e-08,45;UBERON:0005172,5.55e-07,54;UBERON:0005173,5.55e-07,54;UBERON:0005911,6.34e-07,82 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919463387397059,0.300476117813194,0,0,0.213557388818567,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0.368965315629341,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0,1.20859449591622,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0.349934720244983,0,0.670302275535787,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.278847488557207,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0.282706142867882,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0.19566461893209,0.971121518136371,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.292357268344742,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15132729228895,3.21421847686549,2.15691340333392,0,0.0846733320657845,0,0,0,0,0,0,0,0,0.335434687599266,0.709251365692784,0.314727528809989,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0,0,0.732761168390412,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0.168942440653073,0.256241518587947,0.690860683462397,0,0,0,0,0,0,0.245772908753719,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.392590874004102,0.11796972334774,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0,1.00326405540328,0.437119121007915,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919463387397059,0.300476117813194,0,0,0.213557388818567,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0.368965315629341,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0,1.20859449591622,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0.349934720244983,0,0.670302275535787,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.278847488557207,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0.282706142867882,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0.19566461893209,0.971121518136371,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.292357268344742,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15132729228895,3.21421847686549,2.15691340333392,0,0.0846733320657845,0,0,0,0,0,0,0,0,0.335434687599266,0.709251365692784,0.314727528809989,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0,0,0.732761168390412,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0.168942440653073,0.256241518587947,0.690860683462397,0,0,0,0,0,0,0.245772908753719,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.392590874004102,0.11796972334774,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0,1.00326405540328,0.437119121007915,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr19:34664331..34664347,- | |short_description=p@chr19:34664331..34664347,- | ||
}} | }} |
Latest revision as of 06:21, 26 July 2015
Short description: | p@chr19:34664331..34664347, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:34664331..34664347, - |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.46e-30 | 12 |
perirenal preadipocyte | 2.62e-23 | 1 |
endodermal cell | 9.50e-10 | 58 |
epithelial cell of prostate | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 3.82e-19 | 19 |
digestive gland | 3.82e-19 | 19 |
liver bud | 3.82e-19 | 19 |
hepatic diverticulum | 1.33e-16 | 22 |
liver primordium | 1.33e-16 | 22 |
digestive tract diverticulum | 6.71e-16 | 23 |
epithelial sac | 1.15e-14 | 25 |
epithelium of foregut-midgut junction | 1.15e-14 | 25 |
anatomical boundary | 1.15e-14 | 25 |
hepatobiliary system | 1.15e-14 | 25 |
foregut-midgut junction | 1.15e-14 | 25 |
septum transversum | 1.15e-14 | 25 |
sac | 4.06e-14 | 26 |
perirenal fat | 2.32e-12 | 2 |
exocrine gland | 6.57e-12 | 31 |
exocrine system | 6.57e-12 | 31 |
endocrine gland | 1.36e-10 | 35 |
gut epithelium | 1.85e-10 | 54 |
gland | 1.38e-09 | 59 |
endocrine system | 2.57e-08 | 45 |
abdomen element | 5.55e-07 | 54 |
abdominal segment element | 5.55e-07 | 54 |
endo-epithelium | 6.34e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.40e-08 | 3 |
leiomyoma | 1.40e-08 | 3 |
benign neoplasm | 9.63e-07 | 4 |