FFCP PHASE1:Hg19::chr19:36235944..36235962,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:36235944..36235962,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr19:36235944..36235962,+ | |description=CAGE_peak_at_chr19:36235944..36235962,+ | ||
|id=chr19:36235944..36235962,+ | |id=chr19:36235944..36235962,+ | ||
|ontology_enrichment_celltype=CL:0000860!6.97e-10!45;CL:0002032!1.15e-09!165;CL:0000837!1.15e-09!165;CL:0000037!1.80e-09!172;CL:0000566!1.80e-09!172;CL:0000988!2.01e-09!182;CL:0000738!4.13e-09!140;CL:0002057!6.52e-09!42;CL:0002031!9.66e-09!124;CL:0000763!1.03e-07!112;CL:0000049!1.03e-07!112;CL:0002009!1.30e-07!65;CL:0002087!2.36e-07!119;CL:0000557!3.42e-07!71 | |ontology_enrichment_celltype=CL:0000860!6.97e-10!45;CL:0002032!1.15e-09!165;CL:0000837!1.15e-09!165;CL:0000037!1.80e-09!172;CL:0000566!1.80e-09!172;CL:0000988!2.01e-09!182;CL:0000738!4.13e-09!140;CL:0002057!6.52e-09!42;CL:0002031!9.66e-09!124;CL:0000763!1.03e-07!112;CL:0000049!1.03e-07!112;CL:0002009!1.30e-07!65;CL:0002087!2.36e-07!119;CL:0000557!3.42e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.21e-15;2!CL:0000771;2.21e-15;2!CL:0001016;2.21e-15;2!CL:0000306;2.35e-08;4!CL:0002222;2.35e-08;4!CL:0002224;2.35e-08;4!CL:0000453;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,2.05e-15,2;CL:0001014,2.74e-15,2;CL:0001016,2.74e-15,2;CL:0000306,2.43e-08,4;CL:0002222,2.43e-08,4;CL:0002224,2.43e-08,4;CL:0000453,6.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.21e-07!80 | |ontology_enrichment_uberon=UBERON:0002371!3.21e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.65e-15;8!UBERON:0003135;2.07e-11;11!UBERON:0010077;2.35e-08;4!UBERON:0005389;2.35e-08;4!UBERON:0000484;2.35e-08;4!UBERON:0000965;2.35e-08;4!UBERON:0001803;2.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.65e-15,8;UBERON:0003135,2.07e-11,11;UBERON:0010077,2.43e-08,4;UBERON:0005389,2.43e-08,4;UBERON:0000484,2.43e-08,4;UBERON:0002546,2.43e-08,4;UBERON:0000965,2.43e-08,4;UBERON:0001803,2.43e-08,4;UBERON:0003073,2.43e-08,4;UBERON:0005426,2.43e-08,4 | |||
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| ||
|short_description=p@chr19:36235944..36235962,+ | |short_description=p@chr19:36235944..36235962,+ | ||
}} | }} |
Latest revision as of 06:47, 26 July 2015
Short description: | p@chr19:36235944..36235962, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36235944..36235962, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 2.05e-15 | 2 |
CD1a-positive Langerhans cell | 2.74e-15 | 2 |
immature CD1a-positive Langerhans cell | 2.74e-15 | 2 |
crystallin accumulating cell | 2.43e-08 | 4 |
vertebrate lens cell | 2.43e-08 | 4 |
lens epithelial cell | 2.43e-08 | 4 |
Langerhans cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 2.65e-15 | 8 |
male reproductive organ | 2.07e-11 | 11 |
cuboidal epithelium | 2.43e-08 | 4 |
transparent eye structure | 2.43e-08 | 4 |
simple cuboidal epithelium | 2.43e-08 | 4 |
cranial placode | 2.43e-08 | 4 |
lens of camera-type eye | 2.43e-08 | 4 |
epithelium of lens | 2.43e-08 | 4 |
lens placode | 2.43e-08 | 4 |
lens vesicle | 2.43e-08 | 4 |