FFCP PHASE1:Hg19::chr19:41934082..41934116,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:41934082..41934116,- | |||
|description=CAGE_peak_at_chr19:41934082..41934116,- | |description=CAGE_peak_at_chr19:41934082..41934116,- | ||
|id=chr19:41934082..41934116,- | |id=chr19:41934082..41934116,- | ||
|ontology_enrichment_celltype=CL:0000766!8.32e-19!76;CL:0000839!2.94e-15!70;CL:0002057!3.43e-15!42;CL:0000557!7.43e-15!71;CL:0002194!3.26e-14!63;CL:0000576!3.26e-14!63;CL:0000040!3.26e-14!63;CL:0000559!3.26e-14!63;CL:0000860!1.64e-13!45;CL:0002009!2.09e-13!65;CL:0000763!1.13e-12!112;CL:0000049!1.13e-12!112;CL:0000738!1.33e-09!140;CL:0000037!1.13e-07!172;CL:0000566!1.13e-07!172;CL:0002087!2.27e-07!119;CL:0002032!3.80e-07!165;CL:0000837!3.80e-07!165;CL:0002031!6.03e-07!124 | |ontology_enrichment_celltype=CL:0000766!8.32e-19!76;CL:0000839!2.94e-15!70;CL:0002057!3.43e-15!42;CL:0000557!7.43e-15!71;CL:0002194!3.26e-14!63;CL:0000576!3.26e-14!63;CL:0000040!3.26e-14!63;CL:0000559!3.26e-14!63;CL:0000860!1.64e-13!45;CL:0002009!2.09e-13!65;CL:0000763!1.13e-12!112;CL:0000049!1.13e-12!112;CL:0000738!1.33e-09!140;CL:0000037!1.13e-07!172;CL:0000566!1.13e-07!172;CL:0002087!2.27e-07!119;CL:0002032!3.80e-07!165;CL:0000837!3.80e-07!165;CL:0002031!6.03e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.82e-08;33!CL:0002057;6.82e-08;33!CL:0000771;5.11e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,5.11e-07,2;CL:0000766,8.65e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0009143;8.83e-13;1!UBERON:0008814;8.28e-07;2!UBERON:0010056;8.28e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.39e-15!115;UBERON:0002371!9.86e-12!80;UBERON:0002390!4.95e-11!102;UBERON:0003061!4.95e-11!102;UBERON:0001474!4.63e-10!86;UBERON:0002193!1.45e-09!112;UBERON:0004765!1.13e-08!101;UBERON:0001434!1.13e-08!101;UBERON:0002405!1.27e-07!115;UBERON:0000062!5.61e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;6.15e-21;4!UBERON:0001723;1.22e-15;3!UBERON:0001033;1.22e-15;3!UBERON:0002372;2.32e-12;1!UBERON:0001000;2.32e-12;1!UBERON:0001961;2.32e-12;1!UBERON:0001744;2.32e-12;1!UBERON:0005352;2.32e-12;1!UBERON:0001042;2.32e-12;1!UBERON:0001735;2.32e-12;1!UBERON:0000160;3.15e-10;17!UBERON:0004921;8.16e-10;33!UBERON:0005409;4.81e-08;22!UBERON:0001555;1.31e-07;54!UBERON:0001905;8.28e-07;2!UBERON:0006562;8.28e-07;2!UBERON:0002757;8.28e-07;2!UBERON:0010134;8.28e-07;2!UBERON:0005408;8.28e-07;2!UBERON:0001899;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.97e-21,4;UBERON:0001723,1.77e-15,3;UBERON:0001033,1.77e-15,3;UBERON:0010056,1.77e-15,3;UBERON:0001000,3.08e-12,1;UBERON:0005352,3.08e-12,1;UBERON:0002372,4.81e-12,1;UBERON:0001961,4.81e-12,1;UBERON:0001744,4.81e-12,1;UBERON:0001735,4.81e-12,1;UBERON:0001042,2.47e-10,10;UBERON:0009145,2.47e-10,10;UBERON:0000160,2.73e-10,17;UBERON:0006562,1.91e-09,11;UBERON:0005409,3.56e-07,25;UBERON:0001905,5.73e-07,2;UBERON:0002757,5.73e-07,2;UBERON:0010134,5.73e-07,2;UBERON:0005408,5.73e-07,2;UBERON:0001899,5.73e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.534893840235659,0.164201178899891,0.236132343941038,0.786728553697808,0.767658796194425,0.77408061658038,0.919421224478927,0,0.369754010166788,0,0,0,0,0.802177789880567,0.651032612147555,0.223915474239924,0,0.515151135268373,0.290796477559129,1.13362783106643,0.242584061187816,0.697287110717054,0.411167888021826,0.619412741790207,0.28769239232215,0,0.47296445977717,1.37898272294647,0.645484683583826,0,0.564727018627814,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0.598390972864896,0,0.580418477257168,0,0,0.502497330513487,0,0.217188844705117,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0,1.12328631146495,1.50176892841506,1.44653028027372,0.570025487482497,0.59675003159727,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0.364295288292542,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0.949265659568129,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.219500570817251,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0.207328115540772,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,1.49801404789436,0,0,0.12269149171914,0,0,0.207970861530807,0,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.320182673410333,0,0,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0.184161977871793,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,0.376575203107117,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0.169291777801603,0.321176150207399,0.403599414382095,0,0,0.307240764308458,0.223676107892416,0.667396566847634,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0.296964680832639,0,0,0.281338832821026,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.331737779793674,0,0.438770794307945,0,0.278847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,1.23840590304675,0.611030144933625,0,0,0,0,0,0,0,0,0,1.18375320854817,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0.853828638089378,0,0,0.881931576729399,0.0870592065804026,0.52418000472609,0,0,0,0,2.42472541221049,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0.669514372325618,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.182248669974074,0,0.315222829196793,0.681909645754975,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0,0,0.747511887973863,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0.491545817507439,0,0,0.213383459388282,0,0,0,0.139879507719444,0,0,0.107824811396682,0,0,0,0,0.495743057036009,0.558644917973244,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0,0,0.414943514785307,0.322951291263702,0,0,0,0,0.231051332300676,0,0,0,0,0,0.781514011233092,0,0,0.295712172434091,0.337687923091973,0,0,0.317079050969534,0.546974809018219,0,0,0,0,0.535701835878287,1.68141861109412,0,0.227662191351298,0,0,0,0.883606528698812,0.328863867814245,0,0,0.235479278551542,0.157115589916002,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85544384999395,4.15263164957519,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,0.281951753939561,0.257831551894309,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.0645889098360061,0.496597714366863,0.33639558774184,0.1909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| ||
|short_description=p@chr19:41934082..41934116,- | |short_description=p@chr19:41934082..41934116,- | ||
}} | }} |
Latest revision as of 08:31, 26 July 2015
Short description: | p@chr19:41934082..41934116, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:41934082..41934116, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 5.11e-07 | 2 |
myeloid leukocyte | 8.65e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
small intestine | 3.97e-21 | 4 |
tongue | 1.77e-15 | 3 |
gustatory system | 1.77e-15 | 3 |
future tongue | 1.77e-15 | 3 |
vas deferens | 3.08e-12 | 1 |
spermatic cord | 3.08e-12 | 1 |
tonsil | 4.81e-12 | 1 |
mucosa-associated lymphoid tissue | 4.81e-12 | 1 |
lymphoid tissue | 4.81e-12 | 1 |
tonsillar ring | 4.81e-12 | 1 |
chordate pharynx | 2.47e-10 | 10 |
pharyngeal region of foregut | 2.47e-10 | 10 |
intestine | 2.73e-10 | 17 |
pharynx | 1.91e-09 | 11 |
gastrointestinal system | 3.56e-07 | 25 |
pineal body | 5.73e-07 | 2 |
regional part of epithalamus | 5.73e-07 | 2 |
secretory circumventricular organ | 5.73e-07 | 2 |
circumventricular organ | 5.73e-07 | 2 |
epithalamus | 5.73e-07 | 2 |