FFCP PHASE1:Hg19::chr19:45947725..45947742,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:45947725..45947742,+ | |||
|coexpression_cluster_id=C1438 | |||
|description=CAGE_peak_at_chr19:45947725..45947742,+ | |description=CAGE_peak_at_chr19:45947725..45947742,+ | ||
|id=chr19:45947725..45947742,+ | |id=chr19:45947725..45947742,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.12e-36!140;CL:0000037!2.05e-32!172;CL:0000566!2.05e-32!172;CL:0002032!8.02e-31!165;CL:0000837!8.02e-31!165;CL:0002087!1.88e-29!119;CL:0000988!6.27e-29!182;CL:0002031!6.97e-29!124;CL:0002057!4.90e-21!42;CL:0000860!7.57e-19!45;CL:0000766!8.08e-19!76;CL:0000557!5.33e-16!71;CL:0000763!1.47e-15!112;CL:0000049!1.47e-15!112;CL:0000542!3.24e-15!53;CL:0000051!3.24e-15!53;CL:0000838!1.75e-14!52;CL:0000839!4.98e-14!70;CL:0002009!6.17e-13!65;CL:0002194!1.56e-12!63;CL:0000576!1.56e-12!63;CL:0000040!1.56e-12!63;CL:0000559!1.56e-12!63;CL:0000134!5.10e-09!358;CL:0002320!2.50e-08!365;CL:0000219!4.05e-08!390;CL:0000945!5.87e-08!24;CL:0000826!5.87e-08!24;CL:0000791!6.27e-08!18;CL:0000789!6.27e-08!18;CL:0002420!6.27e-08!18;CL:0002419!6.27e-08!18;CL:0000790!6.27e-08!18;CL:0002393!1.37e-07!9;CL:0002397!1.37e-07!9 | |ontology_enrichment_celltype=CL:0000738!1.12e-36!140;CL:0000037!2.05e-32!172;CL:0000566!2.05e-32!172;CL:0002032!8.02e-31!165;CL:0000837!8.02e-31!165;CL:0002087!1.88e-29!119;CL:0000988!6.27e-29!182;CL:0002031!6.97e-29!124;CL:0002057!4.90e-21!42;CL:0000860!7.57e-19!45;CL:0000766!8.08e-19!76;CL:0000557!5.33e-16!71;CL:0000763!1.47e-15!112;CL:0000049!1.47e-15!112;CL:0000542!3.24e-15!53;CL:0000051!3.24e-15!53;CL:0000838!1.75e-14!52;CL:0000839!4.98e-14!70;CL:0002009!6.17e-13!65;CL:0002194!1.56e-12!63;CL:0000576!1.56e-12!63;CL:0000040!1.56e-12!63;CL:0000559!1.56e-12!63;CL:0000134!5.10e-09!358;CL:0002320!2.50e-08!365;CL:0000219!4.05e-08!390;CL:0000945!5.87e-08!24;CL:0000826!5.87e-08!24;CL:0000791!6.27e-08!18;CL:0000789!6.27e-08!18;CL:0002420!6.27e-08!18;CL:0002419!6.27e-08!18;CL:0000790!6.27e-08!18;CL:0002393!1.37e-07!9;CL:0002397!1.37e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000767;3.62e-19;3!CL:0000094;5.40e-19;8!CL:0000623;1.38e-18;3!CL:0000081;9.47e-14;11!CL:0000097;6.34e-11;5!CL:0002032;5.94e-07;1!CL:0000557;5.94e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,3.98e-19,3;CL:0000094,5.04e-19,8;CL:0000623,1.16e-18,3;CL:0000825,1.16e-18,3;CL:0000738,1.31e-17,136;CL:0000037,8.76e-15,168;CL:0002032,3.67e-14,161;CL:0000837,3.67e-14,161;CL:0000988,8.80e-14,177;CL:0000081,9.02e-14,11;CL:0000097,6.81e-11,5;CL:0002028,6.81e-11,5;CL:0000766,8.59e-11,72;CL:0002031,4.00e-10,120;CL:0000763,7.58e-09,108;CL:0000049,7.58e-09,108;CL:0002087,7.85e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.33e-18!102;UBERON:0003061!2.33e-18!102;UBERON:0002193!8.62e-16!112;UBERON:0002371!1.32e-15!80;UBERON:0001474!3.14e-14!86;UBERON:0004765!4.18e-10!101;UBERON:0001434!4.18e-10!101;UBERON:0002405!8.17e-09!115;UBERON:0002384!2.18e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.44e-07,98;UBERON:0003061,4.44e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.305653622991805,0.0821005894499457,0.0787107813136792,5.90046415273356,3.0706351847777,4.64448369948228,0,0,0,0.387336002901508,0.284338464974843,0.587200878669695,0,0.601633342410425,1.08505435357926,0,0,0,0.145398238779565,0,0.485168122375632,0.232429036905685,0.822335776043652,1.23882548358041,0.28769239232215,0,0.47296445977717,0.344745680736619,0,1.35426486594342,0.941211697713023,0.545812300115692,1.12361742222542,0,0.320929027076094,0.639337125799041,0,0.598390972864896,0.426224750532694,0.580418477257168,0,0.622822248995575,0.502497330513487,0.521482918420201,0.217188844705117,0,0.368277635987565,0.632924774881769,1.05627643155971,0.425208599930087,0.419317291016752,0.336985893439485,0,0.16072558669708,0.570025487482497,0.39783335439818,0.365328307529268,0,0,0.889509253863555,1.70692089026603,0,0.574752439954483,0.661044872784862,0.954053754535364,1.70763890732835,2.34894875748376,0.764546456250458,3.96513985737078,0,0.526768169550154,0.393419540227666,0.786021525498329,0.205601498999509,0,0.32592226663359,0.473447805734733,1.94826728407911,0.222820913770347,0.294605907474837,1.99380505125259,1.62482318259009,0,0.520237390239513,0,0,0,0.444859689486181,1.07016331235885,1.04535523804977,0,0.383220493601921,1.03088233644789,0.759059076058509,0,0.651083453856419,0,1.20460095262218,0.127986611154418,0,0,0.821127996921047,2.01606743224732,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,1.03664057770386,1.8735593944205,2.14612136824846,0.190493682876507,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36436912242313,2.80315847317372,2.95188983443421,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52927441428475,0.569647187174163,0.476463550915578,0.411362273086194,0,0.540031437238115,1.58625035258854,0,0,0.245040215981032,0.557409525377156,0,0,0,0,0.191505370132367,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0.500547425135725,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.492339221844278,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0.709163045303809,1.03423011972439,0,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0.217294743844016,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0,0.451191321234361,0.392125068635479,0,0,0,0,0.163232808159148,0.282706142867882,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0.0882561266915003,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0.288180834308212,0,0.686379991447858,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0.0846733320657845,0,0.136203406111576,0,0.412618309791701,0.83088067605837,0,3.0952078182318,0,0,0,0.0524545881349981,0,0,0,0,0,0.76280561296425,0,0,0,1.19730191562487,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0.414239055347196,0,0.197611631897944,0.121792598380896,0,0,0.2506898940227,0,0.327872630709804,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0.228840068396924,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0.0714765441766563,0.316027223465453,0.116241425368125,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0.467878926924211,0.198950775161368,0.237840181555137,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0.380095503034311,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0.21771674789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| ||
|short_description=p@chr19:45947725..45947742,+ | |short_description=p@chr19:45947725..45947742,+ | ||
}} | }} |
Latest revision as of 15:00, 27 July 2015
Short description: | p@chr19:45947725..45947742, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45947725..45947742, + |
Coexpression cluster: | C1438_Basophils_CD8_Eosinophils_Natural_CD34_CD133_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 3.98e-19 | 3 |
granulocyte | 5.04e-19 | 8 |
natural killer cell | 1.16e-18 | 3 |
pro-NK cell | 1.16e-18 | 3 |
leukocyte | 1.31e-17 | 136 |
hematopoietic stem cell | 8.76e-15 | 168 |
hematopoietic oligopotent progenitor cell | 3.67e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.67e-14 | 161 |
hematopoietic cell | 8.80e-14 | 177 |
blood cell | 9.02e-14 | 11 |
mast cell | 6.81e-11 | 5 |
basophil mast progenitor cell | 6.81e-11 | 5 |
myeloid leukocyte | 8.59e-11 | 72 |
hematopoietic lineage restricted progenitor cell | 4.00e-10 | 120 |
myeloid cell | 7.58e-09 | 108 |
common myeloid progenitor | 7.58e-09 | 108 |
nongranular leukocyte | 7.85e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.44e-07 | 98 |
blood island | 4.44e-07 | 98 |