FFCP PHASE1:Hg19::chr19:51517952..51517963,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-342bp_to_AK026045_5end | |association_with_transcript=-342bp_to_AK026045_5end | ||
|cluster_id=chr19:51517952..51517963,- | |||
|coexpression_cluster_id=C2501 | |||
|description=CAGE_peak_1_at_AK026045_5end | |description=CAGE_peak_1_at_AK026045_5end | ||
|id=chr19:51517952..51517963,- | |id=chr19:51517952..51517963,- | ||
|ontology_enrichment_celltype=CL:0002159!5.14e-12!13;CL:0000066!5.19e-12!254;CL:0000076!1.25e-11!62;CL:0002076!4.38e-10!43;CL:0002077!2.97e-08!33;CL:0000317!6.95e-08!2;CL:1000448!6.95e-08!2;CL:0002308!6.95e-08!2;CL:0002140!6.95e-08!2;CL:0000575!7.19e-08!2;CL:0000223!8.40e-08!59;CL:0000362!3.41e-07!8;CL:0002251!7.40e-07!21 | |ontology_enrichment_celltype=CL:0002159!5.14e-12!13;CL:0000066!5.19e-12!254;CL:0000076!1.25e-11!62;CL:0002076!4.38e-10!43;CL:0002077!2.97e-08!33;CL:0000317!6.95e-08!2;CL:1000448!6.95e-08!2;CL:0002308!6.95e-08!2;CL:0002140!6.95e-08!2;CL:0000575!7.19e-08!2;CL:0000223!8.40e-08!59;CL:0000362!3.41e-07!8;CL:0002251!7.40e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002231;8.31e-09;3!CL:0002621;1.26e-08;3!CL:0002327;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,8.31e-09,3;CL:0002621,1.21e-08,3;CL:0002327,9.63e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.75e-12;2!UBERON:0010056;1.75e-12;2 | |||
|ontology_enrichment_disease=DOID:1749!2.33e-08!14;DOID:3493!3.40e-07!2;DOID:299!4.88e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.49e-23;1!DOID:3149;1.49e-23;1!DOID:3451;1.75e-12;2!DOID:4159;1.75e-12;2!DOID:0060122;1.75e-12;2!DOID:4929;2.74e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.67e-23,1;DOID:3149,1.67e-23,1;DOID:3451,1.85e-12,2;DOID:4159,1.85e-12,2;DOID:0060122,1.85e-12,2;DOID:4929,2.07e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001723!1.16e-11!3;UBERON:0001033!1.16e-11!3;UBERON:0010056!1.16e-11!3;UBERON:0000166!1.44e-11!21;UBERON:0000161!1.71e-09!35;UBERON:0003102!2.37e-08!95;UBERON:0003343!2.62e-08!4;UBERON:0004785!2.62e-08!4;UBERON:0000165!3.03e-08!28;UBERON:0000930!3.03e-08!28;UBERON:0002294!5.70e-08!7;UBERON:0001173!5.70e-08!7;UBERON:0004912!5.70e-08!7;UBERON:0002419!6.95e-08!2;UBERON:0007771!6.95e-08!2;UBERON:0003297!6.95e-08!2;UBERON:0001821!6.95e-08!2;UBERON:0003487!6.95e-08!2;UBERON:0001820!6.95e-08!2;UBERON:0005089!6.95e-08!2;UBERON:0005088!6.95e-08!2;UBERON:0001004!7.70e-07!72 | |ontology_enrichment_uberon=UBERON:0001723!1.16e-11!3;UBERON:0001033!1.16e-11!3;UBERON:0010056!1.16e-11!3;UBERON:0000166!1.44e-11!21;UBERON:0000161!1.71e-09!35;UBERON:0003102!2.37e-08!95;UBERON:0003343!2.62e-08!4;UBERON:0004785!2.62e-08!4;UBERON:0000165!3.03e-08!28;UBERON:0000930!3.03e-08!28;UBERON:0002294!5.70e-08!7;UBERON:0001173!5.70e-08!7;UBERON:0004912!5.70e-08!7;UBERON:0002419!6.95e-08!2;UBERON:0007771!6.95e-08!2;UBERON:0003297!6.95e-08!2;UBERON:0001821!6.95e-08!2;UBERON:0003487!6.95e-08!2;UBERON:0001820!6.95e-08!2;UBERON:0005089!6.95e-08!2;UBERON:0005088!6.95e-08!2;UBERON:0001004!7.70e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.67e-30;3!UBERON:0001033;2.67e-30;3!UBERON:0004913;3.67e-23;1!UBERON:0003703;3.67e-23;1!UBERON:0001174;3.67e-23;1!UBERON:0004914;3.67e-23;1!UBERON:0000165;5.62e-13;28!UBERON:0001949;1.26e-08;3!UBERON:0002114;1.26e-08;2!UBERON:0003729;1.05e-07;13!UBERON:0000014;7.07e-07;4!UBERON:0001911;8.85e-07;4!UBERON:0003343;8.85e-07;4!UBERON:0002394;8.85e-07;4!UBERON:0004785;8.85e-07;4!UBERON:0003928;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.98e-30,3;UBERON:0001033,1.98e-30,3;UBERON:0010056,1.98e-30,3;UBERON:0004913,2.10e-23,1;UBERON:0003703,2.10e-23,1;UBERON:0001174,2.10e-23,1;UBERON:0004914,2.10e-23,1;UBERON:0000166,1.99e-16,22;UBERON:0000161,1.54e-15,36;UBERON:0000165,1.43e-12,29;UBERON:0000930,1.43e-12,29;UBERON:0003102,8.42e-11,99;UBERON:0001042,7.40e-10,10;UBERON:0009145,7.40e-10,10;UBERON:0006562,4.80e-09,11;UBERON:0002114,1.04e-08,2;UBERON:0001949,1.21e-08,3;UBERON:0003729,1.05e-07,13;UBERON:0001444,1.38e-07,49;UBERON:0000014,7.27e-07,4;UBERON:0003343,9.11e-07,4;UBERON:0004785,9.11e-07,4;UBERON:0001911,9.63e-07,4;UBERON:0005333,9.63e-07,4;UBERON:0008425,9.63e-07,4;UBERON:0005311,9.63e-07,4 | |||
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| ||
|short_description=p1@AK026045 | |short_description=p1@AK026045 | ||
}} | }} |
Latest revision as of 16:36, 27 July 2015
Short description: | p1@AK026045 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK026045_5end |
Coexpression cluster: | C2501_Prostate_tongue_keratoacanthoma_cervical_papillotubular_throat_oral |
Association with transcript: | -342bp_to_AK026045_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 8.31e-09 | 3 |
gingival epithelial cell | 1.21e-08 | 3 |
mammary gland epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.98e-30 | 3 |
gustatory system | 1.98e-30 | 3 |
future tongue | 1.98e-30 | 3 |
hepatopancreatic ampulla | 2.10e-23 | 1 |
extrahepatic bile duct | 2.10e-23 | 1 |
common bile duct | 2.10e-23 | 1 |
duodenal papilla | 2.10e-23 | 1 |
oral opening | 1.99e-16 | 22 |
orifice | 1.54e-15 | 36 |
mouth | 1.43e-12 | 29 |
stomodeum | 1.43e-12 | 29 |
surface structure | 8.42e-11 | 99 |
chordate pharynx | 7.40e-10 | 10 |
pharyngeal region of foregut | 7.40e-10 | 10 |
pharynx | 4.80e-09 | 11 |
duodenum | 1.04e-08 | 2 |
gingival epithelium | 1.21e-08 | 3 |
mouth mucosa | 1.05e-07 | 13 |
subdivision of head | 1.38e-07 | 49 |
zone of skin | 7.27e-07 | 4 |
mucosa of oral region | 9.11e-07 | 4 |
respiratory system mucosa | 9.11e-07 | 4 |
mammary gland | 9.63e-07 | 4 |
mammary bud | 9.63e-07 | 4 |
mammary ridge | 9.63e-07 | 4 |
mammary placode | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.67e-23 | 1 |
keratoacanthoma | 1.67e-23 | 1 |
skin carcinoma | 1.85e-12 | 2 |
skin cancer | 1.85e-12 | 2 |
integumentary system cancer | 1.85e-12 | 2 |
tubular adenocarcinoma | 2.07e-12 | 2 |