FFCP PHASE1:Hg19::chr19:54062315..54062327,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:54062315..54062327,+ | |||
|coexpression_cluster_id=C437 | |||
|description=CAGE_peak_at_chr19:54062315..54062327,+ | |||
|id=chr19:54062315..54062327,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.05e-10!140;CL:0002031!1.53e-08!124;CL:0000766!1.26e-07!76;CL:0000624!1.78e-07!6;CL:0002087!2.71e-07!119;CL:0000037!4.27e-07!172;CL:0000566!4.27e-07!172;CL:0002032!4.82e-07!165;CL:0000837!4.82e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000623;9.56e-17;3!CL:0000624;2.43e-14;6!CL:0000791;1.43e-13;18!CL:0000789;1.43e-13;18!CL:0002419;1.43e-13;18!CL:0000084;1.69e-09;25!CL:0000542;9.89e-09;53!CL:0000226;1.21e-07;3!CL:0000842;1.21e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,8.85e-17,3;CL:0000825,8.85e-17,3;CL:0000738,3.20e-16,136;CL:0002087,8.22e-15,115;CL:0000838,1.73e-14,52;CL:0000624,2.44e-14,6;CL:0000542,3.66e-14,53;CL:0000051,3.66e-14,53;CL:0000791,1.46e-13,18;CL:0000789,1.46e-13,18;CL:0002420,1.46e-13,18;CL:0002419,1.46e-13,18;CL:0000790,1.46e-13,18;CL:0002031,1.65e-12,120;CL:0000037,3.88e-12,168;CL:0000988,2.95e-11,177;CL:0002032,1.93e-10,161;CL:0000837,1.93e-10,161;CL:0000084,1.71e-09,25;CL:0000827,1.71e-09,25;CL:0000226,1.43e-07,3;CL:0000842,1.43e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.43e-13;18!CL:0000051;9.89e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.68e-15!115;UBERON:0001049!5.01e-11!57;UBERON:0005068!5.01e-11!57;UBERON:0006241!5.01e-11!57;UBERON:0007135!5.01e-11!57;UBERON:0000955!1.20e-10!69;UBERON:0006238!1.20e-10!69;UBERON:0002616!2.72e-10!59;UBERON:0002780!1.49e-09!41;UBERON:0001890!1.49e-09!41;UBERON:0006240!1.49e-09!41;UBERON:0002020!3.04e-09!34;UBERON:0003528!3.04e-09!34;UBERON:0003080!3.90e-09!42;UBERON:0002791!1.02e-08!33;UBERON:0002346!1.34e-08!90;UBERON:0001893!2.85e-08!34;UBERON:0001017!3.07e-08!82;UBERON:0003075!3.43e-08!86;UBERON:0007284!3.43e-08!86;UBERON:0002420!3.67e-08!9;UBERON:0007245!3.67e-08!9;UBERON:0010009!3.67e-08!9;UBERON:0010011!3.67e-08!9;UBERON:0000454!3.67e-08!9;UBERON:0005743!5.94e-08!86;UBERON:0002308!1.01e-07!9;UBERON:0000125!1.01e-07!9;UBERON:0001869!2.03e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;8.28e-11;2!UBERON:0003978;1.74e-07;3!UBERON:0000946;1.74e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,7.88e-11,2;UBERON:0003978,1.69e-07,3;UBERON:0009751,1.69e-07,3;UBERON:0000946,1.69e-07,3;UBERON:0002523,1.69e-07,3;UBERON:0005983,1.69e-07,3;UBERON:0002165,1.69e-07,3;UBERON:0002062,1.69e-07,3;UBERON:0007280,1.69e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.00272223735071,2.38711957787437,0.223915474239924,0,0,0,0,0,0.232429036905685,0.822335776043652,0.619412741790207,0.28769239232215,0.768482119587302,0,0.344745680736619,3.22742341791913,0,0.752969358170419,0,0.224723484445085,0,0.320929027076094,0,0,0.398927315243264,0,0.580418477257168,0,0,1.7587406567972,3.12889751052121,0,0,0,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,4.55370375287559,4.69789751496751,6.49864487812889,0,0,0.263384084775077,4.13090517239049,5.89516144123747,8.8408644569789,0,2.60737813306872,1.4203434172042,0,0,0.589211814949674,0.886135578334485,0.812411591295047,0.25618263945135,0.130059347559878,0,0.276350017785848,0,1.63115219478266,1.07016331235885,4.18142095219907,0,0.766440987203842,0,1.77113784413652,0,0,0,0,0,0,0,0,3.42731463482045,5.88368430723716,10.1377082717959,2.43806866313962,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0.496971951695318,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.717558542755448,0,0,0,0,0,0,0.337552664482532,0,0.504867548488229,0,0,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0,0,0,1.09493207722749,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0.290633938513962,0,0.492663237895943,0,1.86595303986695,0.720599767084807,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,1.42636905040718,0,0,0,0.224170287987055,3.74358444383662,7.76259269494262,7.82892521306465,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,0,2.45473382947922,0,0,0,0,0.306923946576125,0.280660094433074,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0.111308705022906,0,0.211125408127993,0.597743964753209,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0.482385754501632,1.52581736317083,0.995213339381022,0.295547618953547,0.219385397153973,0,0,0.307801034015188,0,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0,0.208843899010911,0.202203398942031,0,0,0,0,0.242780379534093,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0.34945333648406,0,0,0.0730893170861856,0,0.0969890164884194,0,0.225980740780532,0,0,0.189932387867636,0.782205530939212,0,0.640358984218058,0,0,0,0,0.14405479798815,0,0.235694034616795,0.135904206073614,0.104602846312333,0.101998217636322,0.288950589901519,0.600420288709789,0.684526894459965,0,0,0,1.11712960508902,0.458320848023367,2.87149209830726,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0.449947783103001,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.258565912723101,0.26446520348538,0,0,0.320362237703084,0.471612915298998,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.332787154610557,0.0620964029413835,0.276697269872462,0,0,0,0,0,0,0,0.233713309847224,0,1.89403005275089,0,0,0,0.453692771289717,0,0,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0.181848659202559,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0.637724760305049,0.495743057036009,0,0,0.0788617450012534,0,0.705351887381368,0,0.385375350578757,0,0.638535436228605,0.41023272848151,0.504143392443436,0,0.645902582527404,0,0,0,0,0,0,0,0.198916222116275,0.676892955143315,0.20170506870352,0,0.261906694481422,0,0,0,0.781078098613847,0.413373593002368,0.0634158101939068,2.7348740450911,0,0.992422356778588,0,0,0,0.672567444437648,3.64179362541979,0.91064876540519,0.0887023701626388,0,0,0.203909198930495,0,0,0,0.078493092850514,0.471346769748006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| |||
|short_description=p@chr19:54062315..54062327,+ | |||
}} |
Latest revision as of 17:00, 27 July 2015
Short description: | p@chr19:54062315..54062327, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54062315..54062327, + |
Coexpression cluster: | C437_CD4_CD8_Natural_CD19_thyroid_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 8.85e-17 | 3 |
pro-NK cell | 8.85e-17 | 3 |
leukocyte | 3.20e-16 | 136 |
nongranular leukocyte | 8.22e-15 | 115 |
lymphoid lineage restricted progenitor cell | 1.73e-14 | 52 |
CD4-positive, alpha-beta T cell | 2.44e-14 | 6 |
lymphocyte | 3.66e-14 | 53 |
common lymphoid progenitor | 3.66e-14 | 53 |
mature alpha-beta T cell | 1.46e-13 | 18 |
alpha-beta T cell | 1.46e-13 | 18 |
immature T cell | 1.46e-13 | 18 |
mature T cell | 1.46e-13 | 18 |
immature alpha-beta T cell | 1.46e-13 | 18 |
hematopoietic lineage restricted progenitor cell | 1.65e-12 | 120 |
hematopoietic stem cell | 3.88e-12 | 168 |
hematopoietic cell | 2.95e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.93e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.93e-10 | 161 |
T cell | 1.71e-09 | 25 |
pro-T cell | 1.71e-09 | 25 |
single nucleate cell | 1.43e-07 | 3 |
mononuclear cell | 1.43e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 7.88e-11 | 2 |
valve | 1.69e-07 | 3 |
cardiac mesenchyme | 1.69e-07 | 3 |
cardial valve | 1.69e-07 | 3 |
tunica intima | 1.69e-07 | 3 |
heart layer | 1.69e-07 | 3 |
endocardium | 1.69e-07 | 3 |
endocardial cushion | 1.69e-07 | 3 |
presumptive endocardium | 1.69e-07 | 3 |