FFCP PHASE1:Hg19::chr1:1148395..1148419,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:1148395..1148419,- | |||
|coexpression_cluster_id=C357 | |coexpression_cluster_id=C357 | ||
|description=CAGE_peak_at_chr1:1148395..1148419,- | |description=CAGE_peak_at_chr1:1148395..1148419,- | ||
|id=chr1:1148395..1148419,- | |id=chr1:1148395..1148419,- | ||
|ontology_enrichment_celltype=CL:0000115!2.42e-19!35;CL:0002139!2.40e-17!24;CL:0002078!9.09e-17!44;CL:0000071!7.08e-12!18;CL:0002546!7.08e-12!18;CL:0000213!8.07e-09!57;CL:0000215!8.07e-09!57;CL:1000413!5.08e-08!9;CL:0005020!3.05e-07!6;CL:0002138!3.05e-07!6;CL:0005022!3.05e-07!6;CL:0002274!4.14e-07!5;CL:0000457!4.14e-07!5;CL:0002191!4.14e-07!5;CL:0000097!4.14e-07!5;CL:0000831!4.14e-07!5;CL:0002028!4.14e-07!5;CL:0000988!5.53e-07!182 | |ontology_enrichment_celltype=CL:0000115!2.42e-19!35;CL:0002139!2.40e-17!24;CL:0002078!9.09e-17!44;CL:0000071!7.08e-12!18;CL:0002546!7.08e-12!18;CL:0000213!8.07e-09!57;CL:0000215!8.07e-09!57;CL:1000413!5.08e-08!9;CL:0005020!3.05e-07!6;CL:0002138!3.05e-07!6;CL:0005022!3.05e-07!6;CL:0002274!4.14e-07!5;CL:0000457!4.14e-07!5;CL:0002191!4.14e-07!5;CL:0000097!4.14e-07!5;CL:0000831!4.14e-07!5;CL:0002028!4.14e-07!5;CL:0000988!5.53e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.41e-27;24!CL:0000115;3.93e-21;36!CL:0000071;2.50e-19;18!CL:0000097;9.21e-17;5!CL:0002078;3.27e-13;45!CL:1000413;3.67e-12;9!CL:0002144;3.45e-11;3!CL:0002138;2.67e-09;6!CL:0000163;3.88e-09;9!CL:0000213;2.32e-08;58!CL:0000215;2.32e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.84e-27,24;CL:0000115,4.78e-25,36;CL:0000071,2.47e-19,18;CL:0002546,2.47e-19,18;CL:0002078,4.42e-19,45;CL:0000097,8.29e-17,5;CL:0002028,8.29e-17,5;CL:0000213,9.19e-14,58;CL:0000215,9.19e-14,58;CL:1000413,2.98e-12,9;CL:0002144,3.76e-11,3;CL:0005020,2.38e-09,6;CL:0002138,2.38e-09,6;CL:0005022,2.38e-09,6;CL:0000163,3.66e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002546;2.50e-19;18!CL:0005022;2.67e-09;6!UBERON:0004872;6.08e-07;7!UBERON:0006965;7.07e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!7.08e-12!18;UBERON:0004638!7.08e-12!18;UBERON:0004852!7.08e-12!18;UBERON:0007023!9.11e-11!115;UBERON:0000487!8.51e-09!22;UBERON:0006914!4.42e-08!25;UBERON:0003915!5.08e-08!9;UBERON:0004700!5.08e-08!9;UBERON:0001917!5.08e-08!9 | |ontology_enrichment_uberon=UBERON:0001986!7.08e-12!18;UBERON:0004638!7.08e-12!18;UBERON:0004852!7.08e-12!18;UBERON:0007023!9.11e-11!115;UBERON:0000487!8.51e-09!22;UBERON:0006914!4.42e-08!25;UBERON:0003915!5.08e-08!9;UBERON:0004700!5.08e-08!9;UBERON:0001917!5.08e-08!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.50e-19;18!UBERON:0001986;2.50e-19;18!UBERON:0004852;2.50e-19;18!UBERON:0000487;2.29e-15;22!UBERON:0006914;3.13e-13;25!UBERON:0003915;3.67e-12;9!UBERON:0004700;3.67e-12;9!UBERON:0001917;3.67e-12;9!UBERON:0010523;3.45e-11;3!UBERON:0001915;3.45e-11;3!UBERON:0001982;3.45e-11;3!UBERON:0000490;3.56e-09;33!UBERON:0002465;4.46e-08;10!UBERON:0000055;5.75e-08;65!UBERON:0001473;5.84e-07;8!UBERON:0004536;5.84e-07;8!UBERON:0006558;5.84e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.47e-19,18;UBERON:0001986,2.47e-19,18;UBERON:0004852,2.47e-19,18;UBERON:0000487,2.27e-15,22;UBERON:0006914,3.11e-13,25;UBERON:0003915,2.98e-12,9;UBERON:0004700,2.98e-12,9;UBERON:0001917,2.98e-12,9;UBERON:0010523,3.76e-11,3;UBERON:0001915,3.76e-11,3;UBERON:0001982,3.76e-11,3;UBERON:0000055,7.84e-11,68;UBERON:0002049,6.78e-09,78;UBERON:0007798,6.78e-09,78;UBERON:0002465,3.87e-08,10;UBERON:0007500,2.60e-07,59;UBERON:0001981,2.60e-07,59;UBERON:0004537,2.60e-07,59;UBERON:0006965,2.60e-07,59;UBERON:0001473,5.38e-07,8;UBERON:0004536,5.38e-07,8;UBERON:0006558,5.38e-07,8;UBERON:0004872,8.14e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.328402357799783,0.550975469195755,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.449446968890169,0.306083892370903,0.641858054152187,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,1.57204305099666,0.411202997999018,7.02183280640848,0,0.473447805734733,0,5.34770193048833,3.53527088969805,3.1014745241707,1.35401931882508,3.0741916734162,4.42201781703586,4.60426132890293,5.80335037350282,4.34704628602579,0,0,0,1.35971211237079,0.766440987203842,1.03088233644789,0.506039384039006,0,0,0.950452044448374,0,0.383959833463255,0,0.473554504088034,0.821127996921047,0,0.534880391567015,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0.596287222100115,2.58070378531837,2.42998351125316,0,2.51699661725944,1.37559020970034,1.67195973229448,0.516833518338658,0.35576626268671,6.6944122552934,34.2404919542775,3.04108842287405,31.4840054237139,0.735326160691737,6.48113558305408,0,0.44905874525234,0.112611480483322,1.53316637465883,0,1.09921046358244,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,4.20725321410337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91902435820403,6.48179717607255,2.66355813128438,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,1.47798971368783,6.4275356829655,4.76854665743776,7.20599767084807,5.42842463733434,0,0,0,0,0,0,0,0,0,0,0,0,3.381211010224,0,0,0,0,0.532844358032199,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.336255431980582,0.197030760201927,0.431255149719035,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393373244878272,0,0,0.784349769176855,0,0,4.54933536283586,0.850468526382578,0.863663664408557,20.0495428497376,0.541892875087706,0,0,0.831076008928724,0.447749509444357,0.219259876645935,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0,0,0,0,0.185803175125719,0,1.28055318027145,0.159426272728822,0,0,0.211673582723883,0,0,0.456469358066384,0,0,0.338583555603207,0,0.201799707191048,0,0,0,0,0,0,0.835218521685727,0,0,0.33307196799782,1.4098700508785,0,3.51619630252546,0,0,0,0,0,0,0,0,0.222617410045812,0.16480387422676,0,1.19548792950642,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0.295930216910801,0,0,0,0,1.99613798001194,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0.227884111694002,0,0,0,0,0,0.533034776018635,0,2.82564461511045,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.353830258013357,0,0.889563386041866,0.494255755786011,0.208843899010911,0.067401132980677,1.60515529459758,0.234264445725339,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.451961481561065,0.137041924646751,0.19871461170299,0,0,0.240476460754601,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0928182968485,0,0.458320848023367,0,0.399358000997982,0.429226048136571,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,1.5748172408605,0,0,0,0.236417121897595,0.472091293214983,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,1.49502377594773,1.10043013569766,1.65695622138878,1.48849806543585,0,0,0,0,1.2534494701135,0.919036730290385,0.327872630709804,0,0,0,0,0,0,0.310482014706917,0,0,0.151649117541648,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.163565394255844,0,0,0,7.79950843834227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0.546974809018219,0,0,0,0,1.07140367175657,0.336283722218824,0,0,0.620916591138472,1.15233987555779,0,0.271878931907327,0.131545547125698,0,0,1.80534113556182,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.860454717640555,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0.513314034281235,0,1.45713297917742,0,0,0,0,0,0,0.463044948647668,0.655678681511872,0,0,0,0.196308467114945,0,0.4226557275834,0,1.2217909337381,1.35361564744512,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0.426467963801962,1.42838658878244,0.0645889098360061,0.4965977143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| ||
|short_description=p@chr1:1148395..1148419,- | |short_description=p@chr1:1148395..1148419,- | ||
}} | }} |
Latest revision as of 19:57, 27 July 2015
Short description: | p@chr1:1148395..1148419, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:1148395..1148419, - |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.84e-27 | 24 |
endothelial cell | 4.78e-25 | 36 |
blood vessel endothelial cell | 2.47e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.47e-19 | 18 |
meso-epithelial cell | 4.42e-19 | 45 |
mast cell | 8.29e-17 | 5 |
basophil mast progenitor cell | 8.29e-17 | 5 |
lining cell | 9.19e-14 | 58 |
barrier cell | 9.19e-14 | 58 |
endothelial cell of artery | 2.98e-12 | 9 |
capillary endothelial cell | 3.76e-11 | 3 |
lymphangioblast | 2.38e-09 | 6 |
endothelial cell of lymphatic vessel | 2.38e-09 | 6 |
vascular lymphangioblast | 2.38e-09 | 6 |
endocrine cell | 3.66e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.47e-19 | 18 |
endothelium | 2.47e-19 | 18 |
cardiovascular system endothelium | 2.47e-19 | 18 |
simple squamous epithelium | 2.27e-15 | 22 |
squamous epithelium | 3.11e-13 | 25 |
endothelial tube | 2.98e-12 | 9 |
arterial system endothelium | 2.98e-12 | 9 |
endothelium of artery | 2.98e-12 | 9 |
microcirculatory vessel | 3.76e-11 | 3 |
endothelium of capillary | 3.76e-11 | 3 |
capillary | 3.76e-11 | 3 |
vessel | 7.84e-11 | 68 |
vasculature | 6.78e-09 | 78 |
vascular system | 6.78e-09 | 78 |
lymphoid system | 3.87e-08 | 10 |
epithelial tube open at both ends | 2.60e-07 | 59 |
blood vessel | 2.60e-07 | 59 |
blood vasculature | 2.60e-07 | 59 |
vascular cord | 2.60e-07 | 59 |
lymphatic vessel | 5.38e-07 | 8 |
lymph vasculature | 5.38e-07 | 8 |
lymphatic part of lymphoid system | 5.38e-07 | 8 |
splanchnic layer of lateral plate mesoderm | 8.14e-07 | 83 |