FFCP PHASE1:Hg19::chr1:120342510..120342533,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:120342510..120342533,- | |||
|coexpression_cluster_id=C400 | |||
|description=CAGE_peak_at_chr1:120342510..120342533,- | |description=CAGE_peak_at_chr1:120342510..120342533,- | ||
|id=chr1:120342510..120342533,- | |id=chr1:120342510..120342533,- | ||
|ontology_enrichment_celltype=CL:0000625!5.42e-38!11;CL:0000791!4.40e-32!18;CL:0000789!4.40e-32!18;CL:0002420!4.40e-32!18;CL:0002419!4.40e-32!18;CL:0000790!4.40e-32!18;CL:0000084!2.78e-26!25;CL:0000827!2.78e-26!25;CL:0000838!3.68e-17!52;CL:0000542!9.10e-17!53;CL:0000051!9.10e-17!53;CL:0002087!2.90e-08!119 | |ontology_enrichment_celltype=CL:0000625!5.42e-38!11;CL:0000791!4.40e-32!18;CL:0000789!4.40e-32!18;CL:0002420!4.40e-32!18;CL:0002419!4.40e-32!18;CL:0000790!4.40e-32!18;CL:0000084!2.78e-26!25;CL:0000827!2.78e-26!25;CL:0000838!3.68e-17!52;CL:0000542!9.10e-17!53;CL:0000051!9.10e-17!53;CL:0002087!2.90e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.45e-59;11!CL:0000791;5.44e-36;18!CL:0000789;5.44e-36;18!CL:0002419;5.44e-36;18!CL:0000084;1.07e-25;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.47e-59,11;CL:0000791,5.46e-36,18;CL:0000789,5.46e-36,18;CL:0002420,5.46e-36,18;CL:0002419,5.46e-36,18;CL:0000790,5.46e-36,18;CL:0000084,1.07e-25,25;CL:0000827,1.07e-25,25;CL:0000838,6.60e-12,52;CL:0000542,1.15e-11,53;CL:0000051,1.15e-11,53 | |||
|ontology_enrichment_development_v019=CL:0000790;5.44e-36;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.29e-09!7;UBERON:0000178!6.22e-07!15;UBERON:0000179!6.22e-07!15;UBERON:0000463!6.22e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0.83593247695339,0.32592226663359,0,0,0.222820913770347,0,0,0,0,0.260118695119756,1.64437904603676,1.65810010671509,6.37566788617116,1.33457906845854,2.40786745280742,0,1.35971211237079,0,0,0,0.318565414324097,1.95325036156926,0,1.80690142893327,2.43174561193395,1.24930726552346,1.18388626022008,1.64225599384209,1.20964045934839,0.267440195783507,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,1.23408681925858,0.648473311192717,0,0,0,0,0,0,0,0,0.478278818186467,0,0,0,0,60.6521904725071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635746315921515,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.2605604493237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516711278688049,0.31037357147929,0,0,0,0,0,0.471464371102113,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0.83593247695339,0.32592226663359,0,0,0.222820913770347,0,0,0,0,0.260118695119756,1.64437904603676,1.65810010671509,6.37566788617116,1.33457906845854,2.40786745280742,0,1.35971211237079,0,0,0,0.318565414324097,1.95325036156926,0,1.80690142893327,2.43174561193395,1.24930726552346,1.18388626022008,1.64225599384209,1.20964045934839,0.267440195783507,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,1.23408681925858,0.648473311192717,0,0,0,0,0,0,0,0,0.478278818186467,0,0,0,0,60.6521904725071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635746315921515,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.2605604493237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516711278688049,0.31037357147929,0,0,0,0,0,0.471464371102113,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr1:120342510..120342533,- | |short_description=p@chr1:120342510..120342533,- | ||
}} | }} |
Latest revision as of 20:20, 27 July 2015
Short description: | p@chr1:120342510..120342533, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:120342510..120342533, - |
Coexpression cluster: | C400_acute_leukemia_chronic_myelodysplastic_NK_pancreas_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.47e-59 | 11 |
mature alpha-beta T cell | 5.46e-36 | 18 |
alpha-beta T cell | 5.46e-36 | 18 |
immature T cell | 5.46e-36 | 18 |
mature T cell | 5.46e-36 | 18 |
immature alpha-beta T cell | 5.46e-36 | 18 |
T cell | 1.07e-25 | 25 |
pro-T cell | 1.07e-25 | 25 |
lymphoid lineage restricted progenitor cell | 6.60e-12 | 52 |
lymphocyte | 1.15e-11 | 53 |
common lymphoid progenitor | 1.15e-11 | 53 |