FFCP PHASE1:Hg19::chr1:142537706..142537723,-: Difference between revisions
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|id=chr1:142537706..142537723,-
|short_description=p@chr1:142537706..142537723,-
|description=CAGE_peak_at_chr1:142537706..142537723,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:142537706..142537723,- | |||
|coexpression_cluster_id=C390 | |||
|description=CAGE_peak_at_chr1:142537706..142537723,- | |||
|id=chr1:142537706..142537723,- | |||
|ontology_enrichment_celltype=CL:0000047!1.55e-14!8;CL:0000540!1.39e-07!6;CL:0000031!1.39e-07!6;CL:0000404!1.39e-07!6;CL:0000214!3.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.34e-57;2!CL:0000214;1.98e-38;3!CL:0000540;4.86e-20;6!CL:0000404;4.86e-20;6!CL:0002319;2.54e-17;25!CL:0000153;1.44e-13;9!CL:0000447;1.44e-13;9!CL:0000327;1.56e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.15e-57,8;CL:0000214,1.80e-38,3;CL:0000540,4.86e-20,6;CL:0000031,4.86e-20,6;CL:0000404,4.86e-20,6;CL:0002319,2.59e-17,25;CL:0000153,1.40e-13,9;CL:0000447,1.40e-13,9;CL:0000327,1.53e-08,15;CL:0000133,6.16e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000031;4.86e-20;6!UBERON:0005062;2.61e-08;4!UBERON:0007284;2.61e-08;4!CL:0000133;5.79e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!3.77e-14!3;UBERON:0009751!3.77e-14!3;UBERON:0000946!3.77e-14!3;UBERON:0002523!3.77e-14!3;UBERON:0005983!3.77e-14!3;UBERON:0002165!3.77e-14!3;UBERON:0002062!3.77e-14!3;UBERON:0007280!3.77e-14!3;UBERON:0002133!7.73e-10!2;UBERON:0002342!1.58e-07!14;UBERON:0005062!1.58e-07!14;UBERON:0006915!3.12e-07!3;UBERON:0002018!3.12e-07!3;UBERON:0002217!3.12e-07!3;UBERON:0007616!3.12e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.98e-38;3!UBERON:0007616;1.98e-38;3!UBERON:0002217;1.98e-38;3!UBERON:0002018;1.98e-38;3!UBERON:0002146;4.20e-29;1!UBERON:0005623;4.20e-29;1!UBERON:0004905;3.93e-15;8!UBERON:0000982;3.93e-15;8!UBERON:0004770;3.93e-15;8!UBERON:0004457;1.44e-13;9!UBERON:0000042;1.44e-13;9!UBERON:0003978;1.20e-10;3!UBERON:0000946;1.20e-10;3!UBERON:0000486;1.99e-10;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.80e-38,3;UBERON:0007616,1.80e-38,3;UBERON:0002217,1.80e-38,3;UBERON:0002018,1.80e-38,3;UBERON:0002146,4.20e-29,1;UBERON:0005623,4.20e-29,1;UBERON:0004905,3.79e-15,8;UBERON:0000982,3.79e-15,8;UBERON:0004770,3.79e-15,8;UBERON:0003978,1.20e-10,3;UBERON:0009751,1.20e-10,3;UBERON:0000946,1.20e-10,3;UBERON:0002523,1.20e-10,3;UBERON:0005983,1.20e-10,3;UBERON:0002165,1.20e-10,3;UBERON:0002062,1.20e-10,3;UBERON:0007280,1.20e-10,3;UBERON:0004457,1.94e-10,12;UBERON:0000042,1.94e-10,12 | |||
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| ||
|short_description=p@chr1:142537706..142537723,- | |||
}} | }} |
Latest revision as of 20:39, 27 July 2015
Short description: | p@chr1:142537706..142537723, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:142537706..142537723, - |
Coexpression cluster: | C390_Neurons_Synoviocyte_optic_Neural_heart_umbilical_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.15e-57 | 8 |
synovial cell | 1.80e-38 | 3 |
neuron | 4.86e-20 | 6 |
neuroblast | 4.86e-20 | 6 |
electrically signaling cell | 4.86e-20 | 6 |
neural cell | 2.59e-17 | 25 |
GAG secreting cell | 1.40e-13 | 9 |
carbohydrate secreting cell | 1.40e-13 | 9 |
extracellular matrix secreting cell | 1.53e-08 | 15 |
neurectodermal cell | 6.16e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.80e-38 | 3 |
layer of synovial tissue | 1.80e-38 | 3 |
synovial joint | 1.80e-38 | 3 |
synovial membrane of synovial joint | 1.80e-38 | 3 |
pulmonary valve | 4.20e-29 | 1 |
semi-lunar valve | 4.20e-29 | 1 |
articulation | 3.79e-15 | 8 |
skeletal joint | 3.79e-15 | 8 |
articular system | 3.79e-15 | 8 |
valve | 1.20e-10 | 3 |
cardiac mesenchyme | 1.20e-10 | 3 |
cardial valve | 1.20e-10 | 3 |
tunica intima | 1.20e-10 | 3 |
heart layer | 1.20e-10 | 3 |
endocardium | 1.20e-10 | 3 |
endocardial cushion | 1.20e-10 | 3 |
presumptive endocardium | 1.20e-10 | 3 |
cavity lining | 1.94e-10 | 12 |
serous membrane | 1.94e-10 | 12 |