FFCP PHASE1:Hg19::chr1:155912696..155912738,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:155912696..155912738,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr1:155912696..155912738,- | |description=CAGE_peak_at_chr1:155912696..155912738,- | ||
|id=chr1:155912696..155912738,- | |id=chr1:155912696..155912738,- | ||
|ontology_enrichment_celltype=CL:0002557!3.25e-09!1 | |ontology_enrichment_celltype=CL:0002557!3.25e-09!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;5.97e-34;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!7.76e-19!11;UBERON:0000160!6.68e-18!27;UBERON:0001155!4.13e-15!9;UBERON:0005409!1.10e-13!35;UBERON:0001154!1.12e-09!1;UBERON:0001153!1.12e-09!1;UBERON:0001882!5.28e-09!1;UBERON:0005403!5.28e-09!1;UBERON:0002363!5.72e-09!1;UBERON:0007647!5.72e-09!1;UBERON:0010115!5.72e-09!1;UBERON:0004921!2.94e-08!129;UBERON:0004185!2.94e-08!129;UBERON:0004907!1.50e-07!5 | |ontology_enrichment_uberon=UBERON:0000059!7.76e-19!11;UBERON:0000160!6.68e-18!27;UBERON:0001155!4.13e-15!9;UBERON:0005409!1.10e-13!35;UBERON:0001154!1.12e-09!1;UBERON:0001153!1.12e-09!1;UBERON:0001882!5.28e-09!1;UBERON:0005403!5.28e-09!1;UBERON:0002363!5.72e-09!1;UBERON:0007647!5.72e-09!1;UBERON:0010115!5.72e-09!1;UBERON:0004921!2.94e-08!129;UBERON:0004185!2.94e-08!129;UBERON:0004907!1.50e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;9.77e-66;17!UBERON:0001155;1.35e-58;9!UBERON:0005409;1.28e-51;22!UBERON:0000059;4.12e-48;11!UBERON:0001154;5.97e-34;1!UBERON:0001153;5.97e-34;1!UBERON:0009854;5.97e-34;1!UBERON:0004921;1.22e-31;33!UBERON:0002108;2.38e-27;4!UBERON:0001555;1.41e-13;54!UBERON:0002114;2.74e-12;2!UBERON:0009856;1.50e-09;4!UBERON:0001007;2.79e-09;81!UBERON:0004907;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.77e-66,17;UBERON:0001155,1.00e-58,9;UBERON:0000059,3.24e-48,11;UBERON:0005409,9.44e-46,25;UBERON:0001154,7.06e-34,1;UBERON:0001153,7.06e-34,1;UBERON:0001045,7.06e-34,1;UBERON:0002108,3.11e-27,4;UBERON:0002114,3.24e-12,2;UBERON:0004921,2.09e-10,118;UBERON:0001007,1.51e-08,145;UBERON:0001555,1.51e-08,145;UBERON:0007026,1.51e-08,145;UBERON:0004907,7.01e-08,5;UBERON:0004119,8.84e-08,160;UBERON:0000925,8.84e-08,160;UBERON:0006595,8.84e-08,160 | |||
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|short_description=p@chr1:155912696..155912738,- | |short_description=p@chr1:155912696..155912738,- | ||
}} | }} |
Latest revision as of 22:23, 27 July 2015
Short description: | p@chr1:155912696..155912738, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:155912696..155912738, - |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 9.77e-66 | 17 |
colon | 1.00e-58 | 9 |
large intestine | 3.24e-48 | 11 |
gastrointestinal system | 9.44e-46 | 25 |
vermiform appendix | 7.06e-34 | 1 |
caecum | 7.06e-34 | 1 |
midgut | 7.06e-34 | 1 |
small intestine | 3.11e-27 | 4 |
duodenum | 3.24e-12 | 2 |
subdivision of digestive tract | 2.09e-10 | 118 |
digestive system | 1.51e-08 | 145 |
digestive tract | 1.51e-08 | 145 |
primitive gut | 1.51e-08 | 145 |
lower digestive tract | 7.01e-08 | 5 |
endoderm-derived structure | 8.84e-08 | 160 |
endoderm | 8.84e-08 | 160 |
presumptive endoderm | 8.84e-08 | 160 |