FFCP PHASE1:Hg19::chr1:158259849..158259854,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=911 | |EntrezGene=entrezgene:911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=1636 | |HGNC=HGNC:1636 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P29017 | |UniProt=uniprot:P29017 | ||
|association_with_transcript=273bp_to_ENST00000368170_5end | |association_with_transcript=273bp_to_ENST00000368170_5end | ||
|cluster_id=chr1:158259849..158259854,+ | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_11_at_CD1C_5end | |description=CAGE_peak_11_at_CD1C_5end | ||
Revision as of 22:55, 27 July 2015
| Short description: | p11@CD1C |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_11_at_CD1C_5end |
| Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
| Association with transcript: | 273bp_to_ENST00000368170_5end |
| EntrezGene: | 911 |
| HGNC: | 1636 |
| UniProt: | P29017 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p11@CD1C |
|---|
0.0
0.5
1.0
1.5
2.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| thymus | 1.55e-98 | 4 |
| hemolymphoid system gland | 1.55e-98 | 4 |
| thymic region | 1.55e-98 | 4 |
| pharyngeal gland | 1.55e-98 | 4 |
| thymus primordium | 1.55e-98 | 4 |
| pharyngeal epithelium | 2.83e-66 | 6 |
| hemopoietic organ | 4.76e-57 | 7 |
| immune organ | 4.76e-57 | 7 |
| neck | 2.00e-40 | 10 |
| gland of gut | 2.00e-40 | 10 |
Showing 1 to 10 of 27 entries
