FFCP PHASE1:Hg19::chr1:178300738..178300742,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:178300738..178300742,+ | |||
|description=CAGE_peak_at_chr1:178300738..178300742,+ | |description=CAGE_peak_at_chr1:178300738..178300742,+ | ||
|id=chr1:178300738..178300742,+ | |id=chr1:178300738..178300742,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;8.55e-14;1!CL:0000047;1.54e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!9.35e-08!106 | |ontology_enrichment_disease=DOID:305!9.35e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:3910;1.54e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.45e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!8.46e-10!86;UBERON:0001017!1.19e-09!82;UBERON:0000033!1.74e-08!123;UBERON:0000955!2.56e-08!69;UBERON:0006238!2.56e-08!69;UBERON:0000073!2.71e-08!94;UBERON:0001016!2.71e-08!94;UBERON:0002780!3.83e-08!41;UBERON:0001890!3.83e-08!41;UBERON:0006240!3.83e-08!41;UBERON:0000924!5.43e-08!173;UBERON:0006601!5.43e-08!173;UBERON:0000153!5.81e-08!129;UBERON:0007811!5.81e-08!129;UBERON:0004121!8.28e-08!169;UBERON:0003080!9.97e-08!42;UBERON:0001049!1.56e-07!57;UBERON:0005068!1.56e-07!57;UBERON:0006241!1.56e-07!57;UBERON:0007135!1.56e-07!57;UBERON:0002616!2.06e-07!59;UBERON:0002346!2.81e-07!90;UBERON:0003075!3.91e-07!86;UBERON:0007284!3.91e-07!86;UBERON:0003056!8.30e-07!61 | |ontology_enrichment_uberon=UBERON:0005743!8.46e-10!86;UBERON:0001017!1.19e-09!82;UBERON:0000033!1.74e-08!123;UBERON:0000955!2.56e-08!69;UBERON:0006238!2.56e-08!69;UBERON:0000073!2.71e-08!94;UBERON:0001016!2.71e-08!94;UBERON:0002780!3.83e-08!41;UBERON:0001890!3.83e-08!41;UBERON:0006240!3.83e-08!41;UBERON:0000924!5.43e-08!173;UBERON:0006601!5.43e-08!173;UBERON:0000153!5.81e-08!129;UBERON:0007811!5.81e-08!129;UBERON:0004121!8.28e-08!169;UBERON:0003080!9.97e-08!42;UBERON:0001049!1.56e-07!57;UBERON:0005068!1.56e-07!57;UBERON:0006241!1.56e-07!57;UBERON:0007135!1.56e-07!57;UBERON:0002616!2.06e-07!59;UBERON:0002346!2.81e-07!90;UBERON:0003075!3.91e-07!86;UBERON:0007284!3.91e-07!86;UBERON:0003056!8.30e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;8.55e-14;1!UBERON:0002426;8.55e-14;1!UBERON:0003831;8.55e-14;1!UBERON:0003898;8.55e-14;1!UBERON:0004830;8.55e-14;1!UBERON:0005208;8.55e-14;1!UBERON:0003830;8.55e-14;1!UBERON:0005175;8.55e-14;1!UBERON:0001774;8.55e-14;1!UBERON:0004145;8.55e-14;1!UBERON:0005946;8.55e-14;1!UBERON:0001103;8.55e-14;1!UBERON:0005965;8.55e-14;1!UBERON:0002078;8.55e-14;1!UBERON:0004903;1.54e-07;2!UBERON:0005090;1.54e-07;2!UBERON:0001630;1.54e-07;2!UBERON:0002081;1.54e-07;2!UBERON:0002133;1.54e-07;2!UBERON:0002173;1.54e-07;2!UBERON:0002186;1.54e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,4.53e-14,1;UBERON:0003831,4.53e-14,1;UBERON:0003898,4.53e-14,1;UBERON:0004830,4.53e-14,1;UBERON:0003830,4.53e-14,1;UBERON:0005175,4.53e-14,1;UBERON:0001774,4.53e-14,1;UBERON:0001103,4.53e-14,1;UBERON:0010084,4.53e-14,1;UBERON:0002134,5.15e-14,1;UBERON:0005208,5.15e-14,1;UBERON:0005946,5.15e-14,1;UBERON:0005965,5.15e-14,1;UBERON:0002078,5.15e-14,1;UBERON:0005090,1.12e-07,2;UBERON:0001630,1.12e-07,2;UBERON:0002081,1.20e-07,2;UBERON:0002133,1.20e-07,2;UBERON:0010227,1.20e-07,2;UBERON:0004903,1.45e-07,2;UBERON:0002173,1.45e-07,2;UBERON:0002186,1.45e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0.398927315243264,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0.973269740605272,0.378139268656271,0.443458794925128,0.527008714158756,0.130979075497713,0,0,0.97364218096405,0.174129737299267,1.86141144726411,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0,0,0.71153252537342,0,0,0.760272105718513,0.24406205754817,0,0,0.357198913136319,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.529636723252875,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.421352420106746,0.408308342509787,0.368502951935304,0,1.18800285728205,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0.438977620880838,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0,1.0126579934476,0,0.252433774244115,0,0,0,0.10075209822764,0,0.386521706326594,0.818238361772504,0.286804595389004,0,0,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0.380508304469197,0,0,0.246217006087397,1.40402559083543,0.594524649154913,0,0,0,0,0,0,0,0,0.414656231081544,0,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0.358121926479791,0.112085143993527,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0.831883446123229,0.535286966391485,0.473107245101804,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0.114814448164607,0.364182336013434,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0.640986253728404,0.41254749960294,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.429680979473094,0.435050081742686,0.170453254832202,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,5.01268954180134,0,0,0,0.851692475380653,0,0.614481528616916,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0.329607748453519,0.422250816255987,0.398495976502139,0,0.251932747854276,0.409074730008619,0,0.311039587661807,0.539210106883961,0,0.511572370226872,0,0,0,0,0,1.99613798001194,0.260427761085233,0.0874599999961957,0,0.341380344856499,1.27126825146383,0.472775363535873,0,0,0,0,0.482385754501632,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0.227884111694002,1.1528195219403,0.269272933229316,0.108647371922008,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0.282706142867882,0,0,0,1.22206028986725,0.296521128680622,0.123563938946503,0.104421949505455,0.134802265961354,1.60515529459758,0,0,0,0,0,0,0.30607276163049,0.31593289814244,0.300646838828985,0,0,0.330991955875499,0,1.19472429772959,0.284609546029793,0.138674673013139,0.173559738335131,0.489961987071888,0.435296032902013,0.17472666824203,0,0,0,0.0821154570532092,0,0,0.451961481561065,0.274083849293502,0.19871461170299,0.443175571691151,0,0.160317640503067,0,0,0.144090417154106,0.114536596165916,0.171594997861965,0.14405479798815,0.372757606696298,0,0,0.209205692624666,0.101998217636322,0.288950589901519,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,0,1.43574604915363,0.998395002494955,0,0,0.268733889946905,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0.272406812223151,0.643012593860077,0,0.415440338029185,0.449947783103001,0,0.364497339948148,0,0,0.262272940674991,0.105600336519406,0.179287339332845,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0.66116300871345,0.171086837884329,0,0.213574825135389,0,0.414239055347196,0,0.197611631897944,0.121792598380896,0.638341257770182,0.544017803369474,0.2506898940227,0,0.327872630709804,0.157054096250234,0.886068179966986,0.122026264901963,0.3755727921195,1.14681839138014,0.110929051536852,0.124192805882767,0.276697269872462,0,0.151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| ||
|short_description=p@chr1:178300738..178300742,+ | |short_description=p@chr1:178300738..178300742,+ | ||
}} | }} |
Latest revision as of 00:47, 28 July 2015
Short description: | p@chr1:178300738..178300742, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:178300738..178300742, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chest muscle | 4.53e-14 | 1 |
respiratory system muscle | 4.53e-14 | 1 |
skeletal muscle of trunk | 4.53e-14 | 1 |
respiratory system skeletal muscle | 4.53e-14 | 1 |
thoracic segment muscle | 4.53e-14 | 1 |
chest organ | 4.53e-14 | 1 |
muscle of trunk | 4.53e-14 | 1 |
diaphragm | 4.53e-14 | 1 |
future diaphragm | 4.53e-14 | 1 |
tricuspid valve | 5.15e-14 | 1 |
right atrium valve | 5.15e-14 | 1 |
outflow tract of atrium | 5.15e-14 | 1 |
outflow part of right atrium | 5.15e-14 | 1 |
right cardiac atrium | 5.15e-14 | 1 |
muscle structure | 1.12e-07 | 2 |
muscle organ | 1.12e-07 | 2 |
cardiac atrium | 1.20e-07 | 2 |
atrioventricular valve | 1.20e-07 | 2 |
future cardiac atrium | 1.20e-07 | 2 |
bronchoalveolar duct junction | 1.45e-07 | 2 |
alveolar duct | 1.45e-07 | 2 |
bronchiole | 1.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.45e-07 | 2 |