FFCP PHASE1:Hg19::chr1:178700435..178700439,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:178700435..178700439,+ | |||
|description=CAGE_peak_at_chr1:178700435..178700439,+ | |description=CAGE_peak_at_chr1:178700435..178700439,+ | ||
|id=chr1:178700435..178700439,+ | |id=chr1:178700435..178700439,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.62e-29;13!CL:0000511;6.46e-17;1!CL:0002625;6.46e-17;1!CL:0000216;6.46e-17;1!CL:0000228;1.53e-16;1!CL:0002372;1.53e-16;1!CL:0000945;4.75e-16;24!CL:0000542;7.72e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.67e-27,14;CL:0000511,6.47e-17,1;CL:0002625,6.47e-17,1;CL:0000216,6.47e-17,1;CL:0000228,8.86e-17,1;CL:0002372,8.86e-17,1;CL:0000945,4.26e-16,24;CL:0000826,4.26e-16,24;CL:0000838,1.99e-07,52;CL:0000542,2.75e-07,53;CL:0000051,2.75e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.53e-16;1!CL:0000051;7.72e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;1.53e-16;1!DOID:3350;6.17e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,2.63e-16,1;DOID:3350,8.09e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.62e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;6.46e-17;1!UBERON:0001343;6.46e-17;1!UBERON:0004910;6.46e-17;1!UBERON:0004813;6.46e-17;1!UBERON:0001154;1.53e-16;1!UBERON:0001153;1.53e-16;1!UBERON:0009854;1.53e-16;1!UBERON:0004909;4.01e-09;2!UBERON:0001905;6.17e-09;2!UBERON:0002757;6.17e-09;2!UBERON:0010134;6.17e-09;2!UBERON:0005408;6.17e-09;2!UBERON:0001899;6.17e-09;2!UBERON:0001155;1.05e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.47e-17,1;UBERON:0001343,6.47e-17,1;UBERON:0004910,6.47e-17,1;UBERON:0005154,6.47e-17,1;UBERON:0005295,6.47e-17,1;UBERON:0004813,6.47e-17,1;UBERON:0005297,6.47e-17,1;UBERON:0005294,6.47e-17,1;UBERON:0010141,6.47e-17,1;UBERON:0005891,6.47e-17,1;UBERON:0001154,2.25e-16,1;UBERON:0001153,2.25e-16,1;UBERON:0001045,2.25e-16,1;UBERON:0004909,4.02e-09,2;UBERON:0001905,5.08e-09,2;UBERON:0002757,5.08e-09,2;UBERON:0010134,5.08e-09,2;UBERON:0005408,5.08e-09,2;UBERON:0001899,5.08e-09,2;UBERON:0001155,1.09e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0.387336002901508,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0.570025487482497,0.19891667719909,0.182664153764634,1.75996244461323,4.36910889009705,0.889509253863555,8.10787422876364,1.20118796110804,1.14950487990897,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0,0,0,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0,0.794455084879313,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0.140450806702248,0.408308342509787,0.245668634623536,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0.675105328965065,0,0.504867548488229,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.232387885739037,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0.571652865261156,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0.410952645100767,0,0,0,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0.207970861530807,0.535286966391485,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.431428401637234,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0.364182336013434,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,3.21367859688319,0,0,0,0,0.322260734604821,0.145016693914229,0.170453254832202,0,0.165284915360978,0,0,0,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.714695326373367,0.411362273086194,0.648473311192717,0,0.79312517629427,0.106824071127473,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0.796991953004279,1.10513566212459,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0.241192877250816,0,0.221158519862449,0,0.438770794307945,0,0.139423744278603,0.230850775511391,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.442287822516696,1.22206028986725,0.296521128680622,0,0,0,0,0,0.729819156862664,0,0,0.394584402849391,0,0,0.063186579628488,0,0.103688191397247,0,0,0,1.19472429772959,0.284609546029793,0,0,0,0.174118413160805,0.34945333648406,0,0,0,0.164230914106418,0.290967049465258,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0.114536596165916,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.134366944973453,1.08089965062721,0,0.236349546921671,0,0.202210631562555,0,0,0,0.136203406111576,0.321506296930038,0.962776056180637,0,0,0,0.182248669974074,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0.496166021811951,0.790446527591777,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0,0.250381861413,0,0.221858103073705,0.0620964029413835,0.415045904808692,0.124980407962107,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0.463044948647668,0,0,0.308801447160972,0.438568099157414,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.33946505990805,0.425149840203366,0.247871528518004,0,0,0,0,0.705351887381368,0,0.0642292250964595,0,0.159633859057151,0,1.00828678488687,0.0691572524642179,0.161475645631851,0,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0.163771917510097,0.443568258651136,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0.175871244359621,0,0.535701835878287,1.3451348888753,0,0.227662191351298,0,0,0,0.203909198930495,0.131545547125698,0,0,0.078493092850514,0.314231179832004,0,0.913158720509496,0,0,0.357382720883282,0,0,0.347716544605159,0,0,0,0,0,0.118332000730565,0,0,0.68732060563215,0,0,0.111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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0.387336002901508,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0.570025487482497,0.19891667719909,0.182664153764634,1.75996244461323,4.36910889009705,0.889509253863555,8.10787422876364,1.20118796110804,1.14950487990897,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0,0,0,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0,0.794455084879313,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0.140450806702248,0.408308342509787,0.245668634623536,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0.675105328965065,0,0.504867548488229,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.232387885739037,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0.571652865261156,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0.410952645100767,0,0,0,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0.207970861530807,0.535286966391485,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.431428401637234,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0.364182336013434,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,3.21367859688319,0,0,0,0,0.322260734604821,0.145016693914229,0.170453254832202,0,0.165284915360978,0,0,0,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.714695326373367,0.411362273086194,0.648473311192717,0,0.79312517629427,0.106824071127473,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0.796991953004279,1.10513566212459,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0.241192877250816,0,0.221158519862449,0,0.438770794307945,0,0.139423744278603,0.230850775511391,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.442287822516696,1.22206028986725,0.296521128680622,0,0,0,0,0,0.729819156862664,0,0,0.394584402849391,0,0,0.063186579628488,0,0.103688191397247,0,0,0,1.19472429772959,0.284609546029793,0,0,0,0.174118413160805,0.34945333648406,0,0,0,0.164230914106418,0.290967049465258,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0.114536596165916,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.134366944973453,1.08089965062721,0,0.236349546921671,0,0.202210631562555,0,0,0,0.136203406111576,0.321506296930038,0.962776056180637,0,0,0,0.182248669974074,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0.496166021811951,0.790446527591777,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0,0.250381861413,0,0.221858103073705,0.0620964029413835,0.415045904808692,0.124980407962107,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0.463044948647668,0,0,0.308801447160972,0.438568099157414,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.33946505990805,0.425149840203366,0.247871528518004,0,0,0,0,0.705351887381368,0,0.0642292250964595,0,0.159633859057151,0,1.00828678488687,0.0691572524642179,0.161475645631851,0,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0.163771917510097,0.443568258651136,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0.175871244359621,0,0.535701835878287,1.3451348888753,0,0.227662191351298,0,0,0,0.203909198930495,0.131545547125698,0,0,0.078493092850514,0.314231179832004,0,0.913158720509496,0,0,0.357382720883282,0,0,0.347716544605159,0,0,0,0,0,0.118332000730565,0,0,0.68732060563215,0,0,0.111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| ||
|short_description=p@chr1:178700435..178700439,+ | |short_description=p@chr1:178700435..178700439,+ | ||
}} | }} |
Latest revision as of 00:49, 28 July 2015
Short description: | p@chr1:178700435..178700439, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:178700435..178700439, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.67e-27 | 14 |
androgen binding protein secreting cell | 6.47e-17 | 1 |
seminiferous tubule epithelial cell | 6.47e-17 | 1 |
Sertoli cell | 6.47e-17 | 1 |
multinucleate cell | 8.86e-17 | 1 |
myotube | 8.86e-17 | 1 |
lymphocyte of B lineage | 4.26e-16 | 24 |
pro-B cell | 4.26e-16 | 24 |
lymphoid lineage restricted progenitor cell | 1.99e-07 | 52 |
lymphocyte | 2.75e-07 | 53 |
common lymphoid progenitor | 2.75e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.47e-17 | 1 |
seminiferous tubule of testis | 6.47e-17 | 1 |
epithelium of male gonad | 6.47e-17 | 1 |
epithelial cord | 6.47e-17 | 1 |
sex cord | 6.47e-17 | 1 |
seminiferous tubule epithelium | 6.47e-17 | 1 |
testis sex cord | 6.47e-17 | 1 |
genital ridge | 6.47e-17 | 1 |
primitive sex cord of indifferent gonad | 6.47e-17 | 1 |
coelomic epithelium | 6.47e-17 | 1 |
vermiform appendix | 2.25e-16 | 1 |
caecum | 2.25e-16 | 1 |
midgut | 2.25e-16 | 1 |
epithelium of gonad | 4.02e-09 | 2 |
pineal body | 5.08e-09 | 2 |
regional part of epithalamus | 5.08e-09 | 2 |
secretory circumventricular organ | 5.08e-09 | 2 |
circumventricular organ | 5.08e-09 | 2 |
epithalamus | 5.08e-09 | 2 |
colon | 1.09e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 2.63e-16 | 1 |
mesenchymal cell neoplasm | 8.09e-09 | 2 |